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The 2022 Report on the Human Proteome from the HUPO Human Proteome Project.
Omenn GS, Lane L, Overall CM, Pineau C, Packer NH, Cristea IM, Lindskog C, Weintraub ST, Orchard S, Roehrl MHA, Nice E, Liu S, Bandeira N, Chen YJ, Guo T, Aebersold R, Moritz RL, Deutsch EW. Omenn GS, et al. Among authors: liu s. J Proteome Res. 2023 Apr 7;22(4):1024-1042. doi: 10.1021/acs.jproteome.2c00498. Epub 2022 Nov 1. J Proteome Res. 2023. PMID: 36318223 Free PMC article. Review.
Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome Project.
Horvatovich P, Lundberg EK, Chen YJ, Sung TY, He F, Nice EC, Goode RJ, Yu S, Ranganathan S, Baker MS, Domont GB, Velasquez E, Li D, Liu S, Wang Q, He QY, Menon R, Guan Y, Corrales FJ, Segura V, Casal JI, Pascual-Montano A, Albar JP, Fuentes M, Gonzalez-Gonzalez M, Diez P, Ibarrola N, Degano RM, Mohammed Y, Borchers CH, Urbani A, Soggiu A, Yamamoto T, Salekdeh GH, Archakov A, Ponomarenko E, Lisitsa A, Lichti CF, Mostovenko E, Kroes RA, Rezeli M, Végvári Á, Fehniger TE, Bischoff R, Vizcaíno JA, Deutsch EW, Lane L, Nilsson CL, Marko-Varga G, Omenn GS, Jeong SK, Lim JS, Paik YK, Hancock WS. Horvatovich P, et al. Among authors: liu s. J Proteome Res. 2015 Sep 4;14(9):3415-31. doi: 10.1021/pr5013009. Epub 2015 Jul 23. J Proteome Res. 2015. PMID: 26076068 Free article.
Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry.
Collins BC, Hunter CL, Liu Y, Schilling B, Rosenberger G, Bader SL, Chan DW, Gibson BW, Gingras AC, Held JM, Hirayama-Kurogi M, Hou G, Krisp C, Larsen B, Lin L, Liu S, Molloy MP, Moritz RL, Ohtsuki S, Schlapbach R, Selevsek N, Thomas SN, Tzeng SC, Zhang H, Aebersold R. Collins BC, et al. Among authors: liu y, liu s. Nat Commun. 2017 Aug 21;8(1):291. doi: 10.1038/s41467-017-00249-5. Nat Commun. 2017. PMID: 28827567 Free PMC article.
Research on the Human Proteome Reaches a Major Milestone: >90% of Predicted Human Proteins Now Credibly Detected, According to the HUPO Human Proteome Project.
Omenn GS, Lane L, Overall CM, Cristea IM, Corrales FJ, Lindskog C, Paik YK, Van Eyk JE, Liu S, Pennington SR, Snyder MP, Baker MS, Bandeira N, Aebersold R, Moritz RL, Deutsch EW. Omenn GS, et al. Among authors: liu s. J Proteome Res. 2020 Dec 4;19(12):4735-4746. doi: 10.1021/acs.jproteome.0c00485. Epub 2020 Oct 19. J Proteome Res. 2020. PMID: 32931287 Free PMC article.
Progress Identifying and Analyzing the Human Proteome: 2021 Metrics from the HUPO Human Proteome Project.
Omenn GS, Lane L, Overall CM, Paik YK, Cristea IM, Corrales FJ, Lindskog C, Weintraub S, Roehrl MHA, Liu S, Bandeira N, Srivastava S, Chen YJ, Aebersold R, Moritz RL, Deutsch EW. Omenn GS, et al. Among authors: liu s. J Proteome Res. 2021 Dec 3;20(12):5227-5240. doi: 10.1021/acs.jproteome.1c00590. Epub 2021 Oct 20. J Proteome Res. 2021. PMID: 34670092 Free PMC article.
The 2023 Report on the Proteome from the HUPO Human Proteome Project.
Omenn GS, Lane L, Overall CM, Lindskog C, Pineau C, Packer NH, Cristea IM, Weintraub ST, Orchard S, Roehrl MHA, Nice E, Guo T, Van Eyk JE, Liu S, Bandeira N, Aebersold R, Moritz RL, Deutsch EW. Omenn GS, et al. Among authors: liu s. J Proteome Res. 2024 Feb 2;23(2):532-549. doi: 10.1021/acs.jproteome.3c00591. Epub 2024 Jan 17. J Proteome Res. 2024. PMID: 38232391 Free PMC article. Review.
Proteome atlas of human chromosome 8 and its multiple 8p deficiencies in tumorigenesis of the stomach, colon, and liver.
Zhang Y, Yan G, Zhai L, Xu S, Shen H, Yao J, Wu F, Xie L, Tang H, Yu H, Liu M, Yang P, Xu P, Zhang C, Li L, Chang C, Li N, Wu S, Zhu Y, Wang Q, Wen B, Lin L, Wang Y, Zheng G, Zhou L, Lu H, Liu S, He F, Zhong F. Zhang Y, et al. Among authors: liu m, liu s. J Proteome Res. 2013 Jan 4;12(1):81-8. doi: 10.1021/pr300834r. Epub 2012 Dec 20. J Proteome Res. 2013. PMID: 23256868
Special Enrichment Strategies Greatly Increase the Efficiency of Missing Proteins Identification from Regular Proteome Samples.
Su N, Zhang C, Zhang Y, Wang Z, Fan F, Zhao M, Wu F, Gao Y, Li Y, Chen L, Tian M, Zhang T, Wen B, Sensang N, Xiong Z, Wu S, Liu S, Yang P, Zhen B, Zhu Y, He F, Xu P. Su N, et al. Among authors: liu s. J Proteome Res. 2015 Sep 4;14(9):3680-92. doi: 10.1021/acs.jproteome.5b00481. Epub 2015 Jul 15. J Proteome Res. 2015. PMID: 26144840
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