Liu S - Search Results

1

Quantitative sequencing using BID-seq uncovers abundant pseudouridines in mammalian mRNA at base resolution.

Dai Q, Zhang LS, Sun HL, Pajdzik K, Yang L, Ye C, Ju CW, Liu S, Wang Y, Zheng Z, Zhang L, Harada BT, Dou X, Irkliyenko I, Feng X, Zhang W, Pan T, He C. Dai Q, et al. Among authors: liu s. Nat Biotechnol. 2023 Mar;41(3):344-354. doi: 10.1038/s41587-022-01505-w. Epub 2022 Oct 27. Nat Biotechnol. 2023. PMID: 36302989 Free PMC article.

2

REPIC: a database for exploring the N⁶-methyladenosine methylome.

Liu S, Zhu A, He C, Chen M. Liu S, et al. Genome Biol. 2020 Apr 28;21(1):100. doi: 10.1186/s13059-020-02012-4. Genome Biol. 2020. PMID: 32345346 Free PMC article.

3

Stabilization of ERK-Phosphorylated METTL3 by USP5 Increases m⁶A Methylation.

Sun HL, Zhu AC, Gao Y, Terajima H, Fei Q, Liu S, Zhang L, Zhang Z, Harada BT, He YY, Bissonnette MB, Hung MC, He C. Sun HL, et al. Among authors: liu s. Mol Cell. 2020 Nov 19;80(4):633-647.e7. doi: 10.1016/j.molcel.2020.10.026. Mol Cell. 2020. PMID: 33217317 Free PMC article.

4

RNA demethylation increases the yield and biomass of rice and potato plants in field trials.

Yu Q, Liu S, Yu L, Xiao Y, Zhang S, Wang X, Xu Y, Yu H, Li Y, Yang J, Tang J, Duan HC, Wei LH, Zhang H, Wei J, Tang Q, Wang C, Zhang W, Wang Y, Song P, Lu Q, Zhang W, Dong S, Song B, He C, Jia G. Yu Q, et al. Among authors: liu s. Nat Biotechnol. 2021 Dec;39(12):1581-1588. doi: 10.1038/s41587-021-00982-9. Epub 2021 Jul 22. Nat Biotechnol. 2021. PMID: 34294912

5

m⁶A RNA modifications are measured at single-base resolution across the mammalian transcriptome.

Hu L, Liu S, Peng Y, Ge R, Su R, Senevirathne C, Harada BT, Dai Q, Wei J, Zhang L, Hao Z, Luo L, Wang H, Wang Y, Luo M, Chen M, Chen J, He C. Hu L, et al. Among authors: liu s. Nat Biotechnol. 2022 Aug;40(8):1210-1219. doi: 10.1038/s41587-022-01243-z. Epub 2022 Mar 14. Nat Biotechnol. 2022. PMID: 35288668 Free PMC article.

6

Detection of m⁶A RNA modifications at single-nucleotide resolution using m⁶A-selective allyl chemical labeling and sequencing.

Peng Y, Meng H, Ge R, Liu S, Chen M, He C, Hu L. Peng Y, et al. Among authors: liu s. STAR Protoc. 2022 Dec 16;3(4):101677. doi: 10.1016/j.xpro.2022.101677. Epub 2022 Sep 15. STAR Protoc. 2022. PMID: 36112507 Free PMC article.

7

m⁶A-SAC-seq for quantitative whole transcriptome m⁶A profiling.

Ge R, Ye C, Peng Y, Dai Q, Zhao Y, Liu S, Wang P, Hu L, He C. Ge R, et al. Among authors: liu s. Nat Protoc. 2023 Feb;18(2):626-657. doi: 10.1038/s41596-022-00765-9. Epub 2022 Nov 25. Nat Protoc. 2023. PMID: 36434097 Free PMC article. Review.

8

Author Correction: m⁶A RNA modifications are measured at single-base resolution across the mammalian transcriptome.

Hu L, Liu S, Peng Y, Ge R, Su R, Senevirathne C, Harada BT, Dai Q, Wei J, Zhang L, Hao Z, Luo L, Wang H, Wang Y, Luo M, Chen M, Chen J, He C. Hu L, et al. Among authors: liu s. Nat Biotechnol. 2023 Jan;41(1):150. doi: 10.1038/s41587-022-01616-4. Nat Biotechnol. 2023. PMID: 36450851 No abstract available.

9

Transcriptome-wide profiling and quantification of N⁶-methyladenosine by enzyme-assisted adenosine deamination.

Xiao YL, Liu S, Ge R, Wu Y, He C, Chen M, Tang W. Xiao YL, et al. Among authors: liu s. Nat Biotechnol. 2023 Jul;41(7):993-1003. doi: 10.1038/s41587-022-01587-6. Epub 2023 Jan 2. Nat Biotechnol. 2023. PMID: 36593412 Free PMC article.

10

RBM33 is a unique m⁶A RNA-binding protein that regulates ALKBH5 demethylase activity and substrate selectivity.

Yu F, Zhu AC, Liu S, Gao B, Wang Y, Khudaverdyan N, Yu C, Wu Q, Jiang Y, Song J, Jin L, He C, Qian Z. Yu F, et al. Among authors: liu s. Mol Cell. 2023 Jun 15;83(12):2003-2019.e6. doi: 10.1016/j.molcel.2023.05.010. Epub 2023 May 30. Mol Cell. 2023. PMID: 37257451

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