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The population genomic legacy of the second plague pandemic.
Gopalakrishnan S, Ebenesersdóttir SS, Lundstrøm IKC, Turner-Walker G, Moore KHS, Luisi P, Margaryan A, Martin MD, Ellegaard MR, Magnússon ÓÞ, Sigurðsson Á, Snorradóttir S, Magnúsdóttir DN, Laffoon JE, van Dorp L, Liu X, Moltke I, Ávila-Arcos MC, Schraiber JG, Rasmussen S, Juan D, Gelabert P, de-Dios T, Fotakis AK, Iraeta-Orbegozo M, Vågene ÅJ, Denham SD, Christophersen A, Stenøien HK, Vieira FG, Liu S, Günther T, Kivisild T, Moseng OG, Skar B, Cheung C, Sandoval-Velasco M, Wales N, Schroeder H, Campos PF, Guðmundsdóttir VB, Sicheritz-Ponten T, Petersen B, Halgunset J, Gilbert E, Cavalleri GL, Hovig E, Kockum I, Olsson T, Alfredsson L, Hansen TF, Werge T, Willerslev E, Balloux F, Marques-Bonet T, Lalueza-Fox C, Nielsen R, Stefánsson K, Helgason A, Gilbert MTP. Gopalakrishnan S, et al. Among authors: liu x, liu s. Curr Biol. 2022 Nov 7;32(21):4743-4751.e6. doi: 10.1016/j.cub.2022.09.023. Epub 2022 Oct 1. Curr Biol. 2022. PMID: 36182700 Free PMC article.
Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing.
Mak SST, Gopalakrishnan S, Carøe C, Geng C, Liu S, Sinding MS, Kuderna LFK, Zhang W, Fu S, Vieira FG, Germonpré M, Bocherens H, Fedorov S, Petersen B, Sicheritz-Pontén T, Marques-Bonet T, Zhang G, Jiang H, Gilbert MTP. Mak SST, et al. Among authors: liu s. Gigascience. 2017 Aug 1;6(8):1-13. doi: 10.1093/gigascience/gix049. Gigascience. 2017. PMID: 28854615 Free PMC article.
Erratum to: Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing.
Mak SST, Gopalakrishnan S, Carøe C, Geng C, Liu S, Sinding MS, Kuderna LFK, Zhang W, Fu S, Vieira FG, Germonpré M, Bocherens H, Fedorov S, Petersen B, Sicheritz-Pontén T, Marques-Bonet T, Zhang G, Jiang H, Gilbert MTP. Mak SST, et al. Among authors: liu s. Gigascience. 2018 Dec 1;7(12):giy151. doi: 10.1093/gigascience/giy151. Gigascience. 2018. PMID: 30535251 Free PMC article. No abstract available.
Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny.
Cappellini E, Welker F, Pandolfi L, Ramos-Madrigal J, Samodova D, Rüther PL, Fotakis AK, Lyon D, Moreno-Mayar JV, Bukhsianidze M, Rakownikow Jersie-Christensen R, Mackie M, Ginolhac A, Ferring R, Tappen M, Palkopoulou E, Dickinson MR, Stafford TW Jr, Chan YL, Götherström A, Nathan SKSS, Heintzman PD, Kapp JD, Kirillova I, Moodley Y, Agusti J, Kahlke RD, Kiladze G, Martínez-Navarro B, Liu S, Sandoval Velasco M, Sinding MS, Kelstrup CD, Allentoft ME, Orlando L, Penkman K, Shapiro B, Rook L, Dalén L, Gilbert MTP, Olsen JV, Lordkipanidze D, Willerslev E. Cappellini E, et al. Among authors: liu s. Nature. 2019 Oct;574(7776):103-107. doi: 10.1038/s41586-019-1555-y. Epub 2019 Sep 11. Nature. 2019. PMID: 31511700 Free PMC article.
The evolutionary history of extinct and living lions.
de Manuel M, Barnett R, Sandoval-Velasco M, Yamaguchi N, Garrett Vieira F, Zepeda Mendoza ML, Liu S, Martin MD, Sinding MS, Mak SST, Carøe C, Liu S, Guo C, Zheng J, Zazula G, Baryshnikov G, Eizirik E, Koepfli KP, Johnson WE, Antunes A, Sicheritz-Ponten T, Gopalakrishnan S, Larson G, Yang H, O'Brien SJ, Hansen AJ, Zhang G, Marques-Bonet T, Gilbert MTP. de Manuel M, et al. Among authors: liu s. Proc Natl Acad Sci U S A. 2020 May 19;117(20):10927-10934. doi: 10.1073/pnas.1919423117. Epub 2020 May 4. Proc Natl Acad Sci U S A. 2020. PMID: 32366643 Free PMC article.
Ancient and modern genomes unravel the evolutionary history of the rhinoceros family.
Liu S, Westbury MV, Dussex N, Mitchell KJ, Sinding MS, Heintzman PD, Duchêne DA, Kapp JD, von Seth J, Heiniger H, Sánchez-Barreiro F, Margaryan A, André-Olsen R, De Cahsan B, Meng G, Yang C, Chen L, van der Valk T, Moodley Y, Rookmaaker K, Bruford MW, Ryder O, Steiner C, Bruins-van Sonsbeek LGR, Vartanyan S, Guo C, Cooper A, Kosintsev P, Kirillova I, Lister AM, Marques-Bonet T, Gopalakrishnan S, Dunn RR, Lorenzen ED, Shapiro B, Zhang G, Antoine PO, Dalén L, Gilbert MTP. Liu S, et al. Cell. 2021 Sep 16;184(19):4874-4885.e16. doi: 10.1016/j.cell.2021.07.032. Epub 2021 Aug 24. Cell. 2021. PMID: 34433011 Free article.
To bee, or not to bee? One leg is the question.
Cavill EL, Liu S, Zhou X, Gilbert MTP. Cavill EL, et al. Among authors: liu s. Mol Ecol Resour. 2022 Jul;22(5):1868-1874. doi: 10.1111/1755-0998.13578. Epub 2022 Jan 11. Mol Ecol Resour. 2022. PMID: 34957693
Evolutionary History of the Hymenoptera.
Peters RS, Krogmann L, Mayer C, Donath A, Gunkel S, Meusemann K, Kozlov A, Podsiadlowski L, Petersen M, Lanfear R, Diez PA, Heraty J, Kjer KM, Klopfstein S, Meier R, Polidori C, Schmitt T, Liu S, Zhou X, Wappler T, Rust J, Misof B, Niehuis O. Peters RS, et al. Among authors: liu s. Curr Biol. 2017 Apr 3;27(7):1013-1018. doi: 10.1016/j.cub.2017.01.027. Epub 2017 Mar 23. Curr Biol. 2017. PMID: 28343967 Free article.
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