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The Innate Immune Cell Profile of the Cornea Predicts the Onset of Ocular Surface Inflammatory Disorders.
J Clin Med. 2019 Dec 2;8(12):2110. doi: 10.3390/jcm8122110.
J Clin Med. 2019.
PMID: 31810226
Free PMC article.
Cluster Analysis of Dry Eye Disease Models Based on Immune Cell Parameters - New Insight Into Therapeutic Perspective.
Lio CT, Dhanda SK, Bose T.
Lio CT, et al.
Front Immunol. 2020 Sep 29;11:1930. doi: 10.3389/fimmu.2020.01930. eCollection 2020.
Front Immunol. 2020.
PMID: 33133058
Free PMC article.
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Small RNA Sequencing in the Tg4-42 Mouse Model Suggests the Involvement of snoRNAs in the Etiology of Alzheimer's Disease.
Lio CT, Kacprowski T, Klaedtke M, Jensen LR, Bouter Y, Bayer TA, Kuss AW.
Lio CT, et al.
J Alzheimers Dis. 2022;87(4):1671-1681. doi: 10.3233/JAD-220110.
J Alzheimers Dis. 2022.
PMID: 35527555
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Functional enrichment of alternative splicing events with NEASE reveals insights into tissue identity and diseases.
Louadi Z, Elkjaer ML, Klug M, Lio CT, Fenn A, Illes Z, Bongiovanni D, Baumbach J, Kacprowski T, List M, Tsoy O.
Louadi Z, et al. Among authors: lio ct.
Genome Biol. 2021 Dec 2;22(1):327. doi: 10.1186/s13059-021-02538-1.
Genome Biol. 2021.
PMID: 34857024
Free PMC article.
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Systematic analysis of alternative splicing in time course data using Spycone.
Lio CT, Grabert G, Louadi Z, Fenn A, Baumbach J, Kacprowski T, List M, Tsoy O.
Lio CT, et al.
Bioinformatics. 2023 Jan 1;39(1):btac846. doi: 10.1093/bioinformatics/btac846.
Bioinformatics. 2023.
PMID: 36579860
Free PMC article.
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Alternative splicing analysis benchmark with DICAST.
Fenn A, Tsoy O, Faro T, Rößler FLM, Dietrich A, Kersting J, Louadi Z, Lio CT, Völker U, Baumbach J, Kacprowski T, List M.
Fenn A, et al. Among authors: lio ct.
NAR Genom Bioinform. 2023 May 30;5(2):lqad044. doi: 10.1093/nargab/lqad044. eCollection 2023 Jun.
NAR Genom Bioinform. 2023.
PMID: 37260511
Free PMC article.
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Comprehensive benchmark of differential transcript usage analysis for static and dynamic conditions.
Lio CT, Düz T, Hoffmann M, Willruth LL, Baumbach J, List M, Tsoy O.
Lio CT, et al.
bioRxiv [Preprint]. 2024 Jan 15:2024.01.14.575548. doi: 10.1101/2024.01.14.575548.
bioRxiv. 2024.
PMID: 38313260
Free PMC article.
Preprint.
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