Lindsay V. Clark - Search Results

Year	Number of Results
2011	1
2014	1
2015	2
2016	2
2017	1
2018	1
2019	3
2020	2
2021	3
2022	6
2023	7
2024	0

1

Identification of diagnostic KASP-SNP markers for routine breeding activities in yam (Dioscorea spp.).

Agre PA, Clark LV, Garcia-Oliveira AL, Bohar R, Adebola P, Asiedu R, Terauchi R, Asfaw A. Agre PA, et al. Among authors: clark lv. Plant Genome. 2023 Dec 13:e20419. doi: 10.1002/tpg2.20419. Online ahead of print. Plant Genome. 2023. PMID: 38093501 Free article.

2

Solving the mystery of Obake rice in Africa: population structure analyses of Oryza longistaminata reveal three genetic groups and evidence of both recent and ancient introgression with O. sativa.

Labroo MR, Clark LV, Zhang S, Hu F, Tao D, Hamilton RS, Sacks EJ. Labroo MR, et al. Among authors: clark lv. Front Plant Sci. 2023 Nov 15;14:1278196. doi: 10.3389/fpls.2023.1278196. eCollection 2023. Front Plant Sci. 2023. PMID: 38034553 Free PMC article.

3

Impact of genotype-calling methodologies on genome-wide association and genomic prediction in polyploids.

Njuguna JN, Clark LV, Lipka AE, Anzoua KG, Bagmet L, Chebukin P, Dwiyanti MS, Dzyubenko E, Dzyubenko N, Ghimire BK, Jin X, Johnson DA, Kjeldsen JB, Nagano H, de Bem Oliveira I, Peng J, Petersen KK, Sabitov A, Seong ES, Yamada T, Yoo JH, Yu CY, Zhao H, Munoz P, Long SP, Sacks EJ. Njuguna JN, et al. Among authors: clark lv. Plant Genome. 2023 Dec;16(4):e20401. doi: 10.1002/tpg2.20401. Epub 2023 Oct 30. Plant Genome. 2023. PMID: 37903749 Free article.

4

Host genetic variation drives the differentiation in the ecological role of the native Miscanthus root-associated microbiome.

Ji N, Liang D, Clark LV, Sacks EJ, Kent AD. Ji N, et al. Among authors: clark lv. Microbiome. 2023 Sep 30;11(1):216. doi: 10.1186/s40168-023-01646-3. Microbiome. 2023. PMID: 37777794 Free PMC article.

5

Known pathogenic gene variants and new candidates detected in Sudden Unexpected Infant Death using Whole Genome Sequencing.

Bard AM, Clark LV, Cosgun E, Aldinger KA, Timms A, Quina LA, Lavista Ferres JM, Jardine D, Haas EA, Becker TM, Pagan CM, Santani A, Martinez D, Barua S, McNutt Z, Nesbitt A, Mitchell EA, Ramirez JM. Bard AM, et al. Among authors: clark lv. medRxiv [Preprint]. 2023 Nov 29:2023.09.11.23295207. doi: 10.1101/2023.09.11.23295207. medRxiv. 2023. PMID: 37745463 Free PMC article. Preprint.

6

Genome-wide association analysis for emergence of deeply sown rice (Oryza sativa) reveals novel aus-specific phytohormone candidate genes for adaptation to dry-direct seeding in the field.

Sakhale SA, Yadav S, Clark LV, Lipka AE, Kumar A, Sacks EJ. Sakhale SA, et al. Among authors: clark lv. Front Plant Sci. 2023 Jun 12;14:1172816. doi: 10.3389/fpls.2023.1172816. eCollection 2023. Front Plant Sci. 2023. PMID: 37377815 Free PMC article.

7

Differential DNA methylation associated with multiple sclerosis and disease modifying treatments in an underrepresented minority population.

Bingen JM, Clark LV, Band MR, Munzir I, Carrithers MD. Bingen JM, et al. Among authors: clark lv. Front Genet. 2023 Jan 4;13:1058817. doi: 10.3389/fgene.2022.1058817. eCollection 2022. Front Genet. 2023. PMID: 36685876 Free PMC article.

8

CRISPR base editing of cis-regulatory elements enables the perturbation of neurodegeneration-linked genes.

Lim CKW, McCallister TX, Saporito-Magriña C, McPheron GD, Krishnan R, Zeballos C MA, Powell JE, Clark LV, Perez-Pinera P, Gaj T. Lim CKW, et al. Among authors: clark lv. Mol Ther. 2022 Dec 7;30(12):3619-3631. doi: 10.1016/j.ymthe.2022.08.008. Epub 2022 Aug 13. Mol Ther. 2022. PMID: 35965414 Free PMC article.

9

Effects of a mildly cooked human-grade dog diet on gene expression, skin and coat health measures, and fecal microbiota of healthy adult dogs.

Geary EL, Oba PM, Applegate CC, Clark LV, Fields CJ, Swanson KS. Geary EL, et al. Among authors: clark lv. J Anim Sci. 2022 Oct 1;100(10):skac265. doi: 10.1093/jas/skac265. J Anim Sci. 2022. PMID: 35965387 Free PMC article.

10

A population-level statistic for assessing Mendelian behavior of genotyping-by-sequencing data from highly duplicated genomes.

Clark LV, Mays W, Lipka AE, Sacks EJ. Clark LV, et al. BMC Bioinformatics. 2022 Mar 22;23(1):101. doi: 10.1186/s12859-022-04635-9. BMC Bioinformatics. 2022. PMID: 35317727 Free PMC article.

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