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KD4v: Comprehensible Knowledge Discovery System for Missense Variant.
Luu TD, Rusu A, Walter V, Linard B, Poidevin L, Ripp R, Moulinier L, Muller J, Raffelsberger W, Wicker N, Lecompte O, Thompson JD, Poch O, Nguyen H. Luu TD, et al. Among authors: linard b. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W71-5. doi: 10.1093/nar/gks474. Epub 2012 May 27. Nucleic Acids Res. 2012. PMID: 22641855 Free PMC article.
Functional insights into the core-TFIIH from a comparative survey.
Bedez F, Linard B, Brochet X, Ripp R, Thompson JD, Moras D, Lecompte O, Poch O. Bedez F, et al. Among authors: linard b. Genomics. 2013 Mar;101(3):178-86. doi: 10.1016/j.ygeno.2012.11.003. Epub 2012 Nov 10. Genomics. 2013. PMID: 23147676 Free article.
OrthoInspector 3.0: open portal for comparative genomics.
Nevers Y, Kress A, Defosset A, Ripp R, Linard B, Thompson JD, Poch O, Lecompte O. Nevers Y, et al. Among authors: linard b. Nucleic Acids Res. 2019 Jan 8;47(D1):D411-D418. doi: 10.1093/nar/gky1068. Nucleic Acids Res. 2019. PMID: 30380106 Free PMC article.
OrthoInspector 2.0: Software and database updates.
Linard B, Allot A, Schneider R, Morel C, Ripp R, Bigler M, Thompson JD, Poch O, Lecompte O. Linard B, et al. Bioinformatics. 2015 Feb 1;31(3):447-8. doi: 10.1093/bioinformatics/btu642. Epub 2014 Oct 1. Bioinformatics. 2015. PMID: 25273105 Free article.
The Quest for Orthologs orthology benchmark service in 2022.
Nevers Y, Jones TEM, Jyothi D, Yates B, Ferret M, Portell-Silva L, Codo L, Cosentino S, Marcet-Houben M, Vlasova A, Poidevin L, Kress A, Hickman M, Persson E, Piližota I, Guijarro-Clarke C; OpenEBench team the Quest for Orthologs Consortium; Iwasaki W, Lecompte O, Sonnhammer E, Roos DS, Gabaldón T, Thybert D, Thomas PD, Hu Y, Emms DM, Bruford E, Capella-Gutierrez S, Martin MJ, Dessimoz C, Altenhoff A. Nevers Y, et al. Nucleic Acids Res. 2022 Jul 5;50(W1):W623-W632. doi: 10.1093/nar/gkac330. Nucleic Acids Res. 2022. PMID: 35552456 Free PMC article.
Standardized benchmarking in the quest for orthologs.
Altenhoff AM, Boeckmann B, Capella-Gutierrez S, Dalquen DA, DeLuca T, Forslund K, Huerta-Cepas J, Linard B, Pereira C, Pryszcz LP, Schreiber F, da Silva AS, Szklarczyk D, Train CM, Bork P, Lecompte O, von Mering C, Xenarios I, Sjölander K, Jensen LJ, Martin MJ, Muffato M; Quest for Orthologs consortium; Gabaldón T, Lewis SE, Thomas PD, Sonnhammer E, Dessimoz C. Altenhoff AM, et al. Among authors: linard b. Nat Methods. 2016 May;13(5):425-30. doi: 10.1038/nmeth.3830. Epub 2016 Apr 4. Nat Methods. 2016. PMID: 27043882 Free PMC article.
40 results