Lin YY - Search Results

1

A diversity of novel type-2 innate lymphoid cell subpopulations revealed during tumour expansion.

Xia CW, Saranchova I, Finkel PL, Besoiu S, Munro L, Pfeifer CG, Haegert A, Lin YY, Le Bihan S, Collins C, Jefferies WA. Xia CW, et al. Among authors: lin yy. Commun Biol. 2024 Jan 3;7(1):12. doi: 10.1038/s42003-023-05536-0. Commun Biol. 2024. PMID: 38172434 Free PMC article.

2

ORMAN: optimal resolution of ambiguous RNA-Seq multimappings in the presence of novel isoforms.

Dao P, Numanagić I, Lin YY, Hach F, Karakoc E, Donmez N, Collins C, Eichler EE, Sahinalp SC. Dao P, et al. Among authors: lin yy. Bioinformatics. 2014 Mar 1;30(5):644-51. doi: 10.1093/bioinformatics/btt591. Epub 2013 Oct 15. Bioinformatics. 2014. PMID: 24130305

3

Mutational Analysis of Gene Fusions Predicts Novel MHC Class I-Restricted T-Cell Epitopes and Immune Signatures in a Subset of Prostate Cancer.

Kalina JL, Neilson DS, Lin YY, Hamilton PT, Comber AP, Loy EMH, Sahinalp SC, Collins CC, Hach F, Lum JJ. Kalina JL, et al. Among authors: lin yy. Clin Cancer Res. 2017 Dec 15;23(24):7596-7607. doi: 10.1158/1078-0432.CCR-17-0618. Epub 2017 Sep 27. Clin Cancer Res. 2017. PMID: 28954787 Free PMC article.

4

Establishment of a neuroendocrine prostate cancer model driven by the RNA splicing factor SRRM4.

Li Y, Chen R, Bowden M, Mo F, Lin YY, Gleave M, Collins C, Dong X. Li Y, et al. Among authors: lin yy. Oncotarget. 2017 Aug 3;8(40):66878-66888. doi: 10.18632/oncotarget.19916. eCollection 2017 Sep 15. Oncotarget. 2017. PMID: 28978002 Free PMC article.

5

Computational identification of micro-structural variations and their proteogenomic consequences in cancer.

Lin YY, Gawronski A, Hach F, Li S, Numanagic I, Sarrafi I, Mishra S, McPherson A, Collins CC, Radovich M, Tang H, Sahinalp SC. Lin YY, et al. Bioinformatics. 2018 May 15;34(10):1672-1681. doi: 10.1093/bioinformatics/btx807. Bioinformatics. 2018. PMID: 29267878 Free PMC article.

6

Structural variation and fusion detection using targeted sequencing data from circulating cell free DNA.

Gawroński AR, Lin YY, McConeghy B, LeBihan S, Asghari H, Koçkan C, Orabi B, Adra N, Pili R, Collins CC, Sahinalp SC, Hach F. Gawroński AR, et al. Among authors: lin yy. Nucleic Acids Res. 2019 Apr 23;47(7):e38. doi: 10.1093/nar/gkz067. Nucleic Acids Res. 2019. PMID: 30759232 Free PMC article.

7

BAP1 haploinsufficiency predicts a distinct immunogenic class of malignant peritoneal mesothelioma.

Shrestha R, Nabavi N, Lin YY, Mo F, Anderson S, Volik S, Adomat HH, Lin D, Xue H, Dong X, Shukin R, Bell RH, McConeghy B, Haegert A, Brahmbhatt S, Li E, Oo HZ, Hurtado-Coll A, Fazli L, Zhou J, McConnell Y, McCart A, Lowy A, Morin GB, Chen T, Daugaard M, Sahinalp SC, Hach F, Le Bihan S, Gleave ME, Wang Y, Churg A, Collins CC. Shrestha R, et al. Among authors: lin d, lin yy. Genome Med. 2019 Feb 18;11(1):8. doi: 10.1186/s13073-019-0620-3. Genome Med. 2019. PMID: 30777124 Free PMC article.

8

CircMiner: accurate and rapid detection of circular RNA through splice-aware pseudo-alignment scheme.

Asghari H, Lin YY, Xu Y, Haghshenas E, Collins CC, Hach F. Asghari H, et al. Among authors: lin yy. Bioinformatics. 2020 Jun 1;36(12):3703-3711. doi: 10.1093/bioinformatics/btaa232. Bioinformatics. 2020. PMID: 32259207

9

Multiomics Characterization of Low-Grade Serous Ovarian Carcinoma Identifies Potential Biomarkers of MEK Inhibitor Sensitivity and Therapeutic Vulnerability.

Shrestha R, Llaurado Fernandez M, Dawson A, Hoenisch J, Volik S, Lin YY, Anderson S, Kim H, Haegert AM, Colborne S, Wong NKY, McConeghy B, Bell RH, Brahmbhatt S, Lee CH, DiMattia GE, Le Bihan S, Morin GB, Collins CC, Carey MS. Shrestha R, et al. Among authors: lin yy. Cancer Res. 2021 Apr 1;81(7):1681-1694. doi: 10.1158/0008-5472.CAN-20-2222. Epub 2021 Jan 13. Cancer Res. 2021. PMID: 33441310

10

Novel Lignin-Capped Silver Nanoparticles against Multidrug-Resistant Bacteria.

Slavin YN, Ivanova K, Hoyo J, Perelshtein I, Owen G, Haegert A, Lin YY, LeBihan S, Gedanken A, Häfeli UO, Tzanov T, Bach H. Slavin YN, et al. Among authors: lin yy. ACS Appl Mater Interfaces. 2021 May 19;13(19):22098-22109. doi: 10.1021/acsami.0c16921. Epub 2021 May 4. ACS Appl Mater Interfaces. 2021. PMID: 33945683 Free article.

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