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1,520 reference genomes from cultivated human gut bacteria enable functional microbiome analyses.
Zou Y, Xue W, Luo G, Deng Z, Qin P, Guo R, Sun H, Xia Y, Liang S, Dai Y, Wan D, Jiang R, Su L, Feng Q, Jie Z, Guo T, Xia Z, Liu C, Yu J, Lin Y, Tang S, Huo G, Xu X, Hou Y, Liu X, Wang J, Yang H, Kristiansen K, Li J, Jia H, Xiao L. Zou Y, et al. Among authors: lin y. Nat Biotechnol. 2019 Feb;37(2):179-185. doi: 10.1038/s41587-018-0008-8. Epub 2019 Feb 4. Nat Biotechnol. 2019. PMID: 30718868 Free PMC article.
Assessment of the cPAS-based BGISEQ-500 platform for metagenomic sequencing.
Fang C, Zhong H, Lin Y, Chen B, Han M, Ren H, Lu H, Luber JM, Xia M, Li W, Stein S, Xu X, Zhang W, Drmanac R, Wang J, Yang H, Hammarström L, Kostic AD, Kristiansen K, Li J. Fang C, et al. Among authors: lin y. Gigascience. 2018 Mar 1;7(3):1-8. doi: 10.1093/gigascience/gix133. Gigascience. 2018. PMID: 29293960 Free PMC article.
Assessment of fecal DNA extraction protocols for metagenomic studies.
Yang F, Sun J, Luo H, Ren H, Zhou H, Lin Y, Han M, Chen B, Liao H, Brix S, Li J, Yang H, Kristiansen K, Zhong H. Yang F, et al. Among authors: lin y. Gigascience. 2020 Jul 1;9(7):giaa071. doi: 10.1093/gigascience/giaa071. Gigascience. 2020. PMID: 32657325 Free PMC article.
Over 50,000 Metagenomically Assembled Draft Genomes for the Human Oral Microbiome Reveal New Taxa.
Zhu J, Tian L, Chen P, Han M, Song L, Tong X, Sun X, Yang F, Lin Z, Liu X, Liu C, Wang X, Lin Y, Cai K, Hou Y, Xu X, Yang H, Wang J, Kristiansen K, Xiao L, Zhang T, Jia H, Jie Z. Zhu J, et al. Among authors: lin z, lin y. Genomics Proteomics Bioinformatics. 2022 Apr;20(2):246-259. doi: 10.1016/j.gpb.2021.05.001. Epub 2021 Sep 4. Genomics Proteomics Bioinformatics. 2022. PMID: 34492339 Free PMC article.
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