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Image processing and analysis methods for the Adolescent Brain Cognitive Development Study.
Hagler DJ Jr, Hatton S, Cornejo MD, Makowski C, Fair DA, Dick AS, Sutherland MT, Casey BJ, Barch DM, Harms MP, Watts R, Bjork JM, Garavan HP, Hilmer L, Pung CJ, Sicat CS, Kuperman J, Bartsch H, Xue F, Heitzeg MM, Laird AR, Trinh TT, Gonzalez R, Tapert SF, Riedel MC, Squeglia LM, Hyde LW, Rosenberg MD, Earl EA, Howlett KD, Baker FC, Soules M, Diaz J, de Leon OR, Thompson WK, Neale MC, Herting M, Sowell ER, Alvarez RP, Hawes SW, Sanchez M, Bodurka J, Breslin FJ, Morris AS, Paulus MP, Simmons WK, Polimeni JR, van der Kouwe A, Nencka AS, Gray KM, Pierpaoli C, Matochik JA, Noronha A, Aklin WM, Conway K, Glantz M, Hoffman E, Little R, Lopez M, Pariyadath V, Weiss SR, Wolff-Hughes DL, DelCarmen-Wiggins R, Feldstein Ewing SW, Miranda-Dominguez O, Nagel BJ, Perrone AJ, Sturgeon DT, Goldstone A, Pfefferbaum A, Pohl KM, Prouty D, Uban K, Bookheimer SY, Dapretto M, Galvan A, Bagot K, Giedd J, Infante MA, Jacobus J, Patrick K, Shilling PD, Desikan R, Li Y, Sugrue L, Banich MT, Friedman N, Hewitt JK, Hopfer C, Sakai J, Tanabe J, Cottler LB, Nixon SJ, Chang L, Cloak C, Ernst T, Reeves G, Kennedy DN, Heeringa S, Peltier S, Schulenberg J, Sripada C, Zucker RA, Iacono WG, Luciana M, Calabro … See abstract for full author list ➔ Hagler DJ Jr, et al. Among authors: li y. Neuroimage. 2019 Nov 15;202:116091. doi: 10.1016/j.neuroimage.2019.116091. Epub 2019 Aug 12. Neuroimage. 2019. PMID: 31415884 Free PMC article.
Rates of Incidental Findings in Brain Magnetic Resonance Imaging in Children.
Li Y, Thompson WK, Reuter C, Nillo R, Jernigan T, Dale A, Sugrue LP; ABCD Consortium; Brown J, Dougherty RF, Rauschecker A, Rudie J, Barch DM, Calhoun V, Hagler D, Hatton S, Tanabe J, Marshall A, Sher KJ, Heeringa S, Hermosillo R, Banich MT, Squeglia L, Bjork J, Zucker R, Neale M, Herting M, Sheth C, Huber R, Reeves G, Hettema JM, Howlett KD, Cloak C, Baskin-Sommers A, Rapuano K, Gonzalez R, Karcher N, Laird A, Baker F, James R, Sowell E, Dick A, Hawes S, Sutherland M, Bagot K, Bodurka J, Breslin F, Morris A, Paulus M, Gray K, Hoffman E, Weiss S, Rajapakse N, Glantz M, Nagel B, Ewing SF, Goldstone A, Pfefferbaum A, Prouty D, Rosenberg M, Bookheimer S, Tapert S, Infante M, Jacobus J, Giedd J, Shilling P, Wade N, Uban K, Haist F, Heyser C, Palmer C, Kuperman J, Hewitt J, Cottler L, Isaiah A, Chang L, Edwards S, Ernst T, Heitzeg M, Puttler L, Sripada C, Iacono W, Luciana M, Clark D, Luna B, Schirda C, Foxe J, Freedman E, Mason M, McGlade E, Renshaw P, Yurgelun-Todd D, Albaugh M, Allgaier N, Chaarani B, Potter A, Ivanova M, Lisdahl K, Do E, Maes H, Bogdan R, Anokhin A, Dosenbach N, Glaser P, Heath A, Casey BJ, Gee D, Garavan HP, Dowling G, Brown S. Li Y, et al. JAMA Neurol. 2021 May 1;78(5):578-587. doi: 10.1001/jamaneurol.2021.0306. JAMA Neurol. 2021. PMID: 33749724 Free PMC article.
Abnormal Morphology of Select Cortical and Subcortical Regions in Neurofibromatosis Type 1.
Barkovich MJ, Tan CH, Nillo RM, Li Y, Xu D, Glastonbury CM, Glenn OA, Dillon WP, Hess CP, Mueller S, Kline C, Dale AM, Jernigan TL, Sugrue LP, Barkovich AJ, Desikan RS. Barkovich MJ, et al. Among authors: li y. Radiology. 2018 Nov;289(2):499-508. doi: 10.1148/radiol.2018172863. Epub 2018 Sep 4. Radiology. 2018. PMID: 30179114 Free PMC article.
BEaST: brain extraction based on nonlocal segmentation technique.
Eskildsen SF, Coupé P, Fonov V, Manjón JV, Leung KK, Guizard N, Wassef SN, Østergaard LR, Collins DL; Alzheimer's Disease Neuroimaging Initiative. Eskildsen SF, et al. Neuroimage. 2012 Feb 1;59(3):2362-73. doi: 10.1016/j.neuroimage.2011.09.012. Epub 2011 Sep 16. Neuroimage. 2012. PMID: 21945694 Free article.
Regionally specific TSC1 and TSC2 gene expression in tuberous sclerosis complex.
Li Y, Barkovich MJ, Karch CM, Nillo RM, Fan CC, Broce IJ, Tan CH, Cuneo D, Hess CP, Dillon WP, Glenn OA, Glastonbury CM, Olney N, Yokoyama JS, Bonham LW, Miller B, Kao A, Schmansky N, Fischl B, Andreassen OA, Jernigan T, Dale A, Barkovich AJ, Desikan RS, Sugrue LP. Li Y, et al. Sci Rep. 2018 Sep 6;8(1):13373. doi: 10.1038/s41598-018-31075-4. Sci Rep. 2018. PMID: 30190613 Free PMC article.
Comparison of human septal nuclei MRI measurements using automated segmentation and a new manual protocol based on histology.
Butler T, Zaborszky L, Pirraglia E, Li J, Wang XH, Li Y, Tsui W, Talos D, Devinsky O, Kuchna I, Nowicki K, French J, Kuzniecky R, Wegiel J, Glodzik L, Rusinek H, deLeon MJ, Thesen T. Butler T, et al. Among authors: li y, li j. Neuroimage. 2014 Aug 15;97:245-51. doi: 10.1016/j.neuroimage.2014.04.026. Epub 2014 Apr 13. Neuroimage. 2014. PMID: 24736183 Free PMC article.
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