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Towards increased accuracy and reproducibility in SARS-CoV-2 next generation sequence analysis for public health surveillance.
Connor R, Yarmosh DA, Maier W, Shakya M, Martin R, Bradford R, Brister JR, Chain PS, Copeland CA, di Iulio J, Hu B, Ebert P, Gunti J, Jin Y, Katz KS, Kochergin A, LaRosa T, Li J, Li PE, Lo CC, Rashid S, Maiorova ES, Xiao C, Zalunin V, Pruitt KD. Connor R, et al. Among authors: li pe. bioRxiv [Preprint]. 2022 Nov 3:2022.11.03.515010. doi: 10.1101/2022.11.03.515010. bioRxiv. 2022. PMID: 36380755 Free PMC article. Updated. Preprint.
Draft Genome Sequence of Thauera sp. Strain SWB20, Isolated from a Singapore Wastewater Treatment Facility Using Gel Microdroplets.
Dichosa AE, Davenport KW, Li PE, Ahmed SA, Daligault H, Gleasner CD, Kunde Y, McMurry K, Lo CC, Reitenga KG, Daughton AR, Shen X, Frietze S, Wang D, Johnson SL, Drautz-Moses DI, Schuster S, Chain PS, Han C. Dichosa AE, et al. Among authors: li pe. Genome Announc. 2015 Mar 19;3(2):e00132-15. doi: 10.1128/genomeA.00132-15. Genome Announc. 2015. PMID: 25792053 Free PMC article.
Under-detection of endospore-forming Firmicutes in metagenomic data.
Filippidou S, Junier T, Wunderlin T, Lo CC, Li PE, Chain PS, Junier P. Filippidou S, et al. Among authors: li pe. Comput Struct Biotechnol J. 2015 Apr 25;13:299-306. doi: 10.1016/j.csbj.2015.04.002. eCollection 2015. Comput Struct Biotechnol J. 2015. PMID: 25973144 Free PMC article.
The National Microbiome Data Collaborative: enabling microbiome science.
Wood-Charlson EM, Anubhav, Auberry D, Blanco H, Borkum MI, Corilo YE, Davenport KW, Deshpande S, Devarakonda R, Drake M, Duncan WD, Flynn MC, Hays D, Hu B, Huntemann M, Li PE, Lipton M, Lo CC, Millard D, Miller K, Piehowski PD, Purvine S, Reddy TBK, Shakya M, Sundaramurthi JC, Vangay P, Wei Y, Wilson BE, Canon S, Chain PSG, Fagnan K, Martin S, McCue LA, Mungall CJ, Mouncey NJ, Maxon ME, Eloe-Fadrosh EA. Wood-Charlson EM, et al. Among authors: li pe. Nat Rev Microbiol. 2020 Jun;18(6):313-314. doi: 10.1038/s41579-020-0377-0. Nat Rev Microbiol. 2020. PMID: 32350400 No abstract available.
33 results