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Chromosome-scale Echinococcus granulosus (genotype G1) genome reveals the Eg95 gene family and conservation of the EG95-vaccine molecule.
Korhonen PK, Kinkar L, Young ND, Cai H, Lightowlers MW, Gauci C, Jabbar A, Chang BCH, Wang T, Hofmann A, Koehler AV, Li J, Li J, Wang D, Yin J, Yang H, Jenkins DJ, Saarma U, Laurimäe T, Rostami-Nejad M, Irshadullah M, Mirhendi H, Sharbatkhori M, Ponce-Gordo F, Simsek S, Casulli A, Zait H, Atoyan H, de la Rue ML, Romig T, Wassermann M, Aghayan SA, Gevorgyan H, Yang B, Gasser RB. Korhonen PK, et al. Among authors: li j. Commun Biol. 2022 Mar 3;5(1):199. doi: 10.1038/s42003-022-03125-1. Commun Biol. 2022. PMID: 35241789 Free PMC article.
Comprehensive characterization of plasma cell-free Echinococcus spp. DNA in echinococcosis patients using ultra-high-throughput sequencing.
Ji J, Li B, Li J, Danzeng W, Li J, Zhao Y, Qiangba G, Zhang Q, Renzhen N, Basang Z, Jia C, Gongsang Q, Ma J, Wang Y, Chen F, Zhou H, Huasang, Yin J, Xie J, Pei N, Cai H, Jiang H, Yang H, Wang J, Asan, Han X, Li J, Chen W, Yang D. Ji J, et al. Among authors: li j, li b. PLoS Negl Trop Dis. 2020 Apr 13;14(4):e0008148. doi: 10.1371/journal.pntd.0008148. eCollection 2020 Apr. PLoS Negl Trop Dis. 2020. PMID: 32282820 Free PMC article.
Characterizing dynamic changes of plasma cell-free Echinococcus granulosus DNA before and after cystic echinococcosis treatment initiation.
Zhao Y, Gongsang Q, Ji J, Li J, Qi F, Li J, Qiangba G, Danzeng W, Chen F, Zhou H, Huasang, Yin J, Pei N, Xie J, Cai H, Asan, Pang H, Li J, Chen W, Li B. Zhao Y, et al. Among authors: li j, li b. Genomics. 2021 Mar;113(2):576-582. doi: 10.1016/j.ygeno.2020.12.035. Epub 2020 Dec 28. Genomics. 2021. PMID: 33383141 Free article.
Echinococcus spp. and genotypes infecting humans in Tibet Autonomous Region of China: a molecular investigation with near-complete/complete mitochondrial sequences.
Zhao Y, Gesang D, Wan L, Li J, Qiangba G, Danzeng W, Basang Z, Renzhen N, Yin J, Gongsang Q, Cai H, Pang H, Wang D, Asan, Zhang Q, Li J, Chen W. Zhao Y, et al. Among authors: li j. Parasit Vectors. 2022 Mar 5;15(1):75. doi: 10.1186/s13071-022-05199-6. Parasit Vectors. 2022. PMID: 35248153 Free PMC article.
Cell-free DNA as a diagnostic tool for human echinococcosis.
Zhao Y, Shen S, Jin X, Wang W, Li J, Chen W. Zhao Y, et al. Among authors: li j. Trends Parasitol. 2021 Nov;37(11):943-946. doi: 10.1016/j.pt.2021.07.006. Epub 2021 Jul 29. Trends Parasitol. 2021. PMID: 34334318
Substantial viral diversity in bats and rodents from East Africa: insights into evolution, recombination, and cocirculation.
Wang D, Yang X, Ren Z, Hu B, Zhao H, Yang K, Shi P, Zhang Z, Feng Q, Nawenja CV, Obanda V, Robert K, Nalikka B, Waruhiu CN, Ochola GO, Onyuok SO, Ochieng H, Li B, Zhu Y, Si H, Yin J, Kristiansen K, Jin X, Xu X, Xiao M, Agwanda B, Ommeh S, Li J, Shi ZL. Wang D, et al. Among authors: li j, li b. Microbiome. 2024 Apr 10;12(1):72. doi: 10.1186/s40168-024-01782-4. Microbiome. 2024. PMID: 38600530 Free PMC article.
Multiple approaches for massively parallel sequencing of SARS-CoV-2 genomes directly from clinical samples.
Xiao M, Liu X, Ji J, Li M, Li J, Yang L, Sun W, Ren P, Yang G, Zhao J, Liang T, Ren H, Chen T, Zhong H, Song W, Wang Y, Deng Z, Zhao Y, Ou Z, Wang D, Cai J, Cheng X, Feng T, Wu H, Gong Y, Yang H, Wang J, Xu X, Zhu S, Chen F, Zhang Y, Chen W, Li Y, Li J. Xiao M, et al. Among authors: li y, li j, li m. Genome Med. 2020 Jun 30;12(1):57. doi: 10.1186/s13073-020-00751-4. Genome Med. 2020. PMID: 32605661 Free PMC article.
Intra-host variation and evolutionary dynamics of SARS-CoV-2 populations in COVID-19 patients.
Wang Y, Wang D, Zhang L, Sun W, Zhang Z, Chen W, Zhu A, Huang Y, Xiao F, Yao J, Gan M, Li F, Luo L, Huang X, Zhang Y, Wong SS, Cheng X, Ji J, Ou Z, Xiao M, Li M, Li J, Ren P, Deng Z, Zhong H, Xu X, Song T, Mok CKP, Peiris M, Zhong N, Zhao J, Li Y, Li J, Zhao J. Wang Y, et al. Among authors: li f, li y, li j, li m. Genome Med. 2021 Feb 22;13(1):30. doi: 10.1186/s13073-021-00847-5. Genome Med. 2021. PMID: 33618765 Free PMC article.
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