Li G - Search Results

1

Genomics research at Bioinformatics of Genome Regulation and Structure\ Systems Biology (BGRS\SB) conferences in Novosibirsk.

Orlov YL, Kochetov AV, Li G, Kolchanov NA. Orlov YL, et al. Among authors: li g. BMC Genomics. 2019 May 8;20(Suppl 3):322. doi: 10.1186/s12864-019-5707-0. BMC Genomics. 2019. PMID: 32039700 Free PMC article. No abstract available.

2

Integrative model of genomic factors for determining binding site selection by estrogen receptor-α.

Joseph R, Orlov YL, Huss M, Sun W, Kong SL, Ukil L, Pan YF, Li G, Lim M, Thomsen JS, Ruan Y, Clarke ND, Prabhakar S, Cheung E, Liu ET. Joseph R, et al. Among authors: li g. Mol Syst Biol. 2010 Dec 21;6:456. doi: 10.1038/msb.2010.109. Mol Syst Biol. 2010. PMID: 21179027 Free PMC article.

3

Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation.

Li G, Ruan X, Auerbach RK, Sandhu KS, Zheng M, Wang P, Poh HM, Goh Y, Lim J, Zhang J, Sim HS, Peh SQ, Mulawadi FH, Ong CT, Orlov YL, Hong S, Zhang Z, Landt S, Raha D, Euskirchen G, Wei CL, Ge W, Wang H, Davis C, Fisher-Aylor KI, Mortazavi A, Gerstein M, Gingeras T, Wold B, Sun Y, Fullwood MJ, Cheung E, Liu E, Sung WK, Snyder M, Ruan Y. Li G, et al. Cell. 2012 Jan 20;148(1-2):84-98. doi: 10.1016/j.cell.2011.12.014. Cell. 2012. PMID: 22265404 Free PMC article.

4

Chromatin Interaction Analysis with Paired-End Tag (ChIA-PET) sequencing technology and application.

Li G, Cai L, Chang H, Hong P, Zhou Q, Kulakova EV, Kolchanov NA, Ruan Y. Li G, et al. BMC Genomics. 2014;15 Suppl 12(Suppl 12):S11. doi: 10.1186/1471-2164-15-S12-S11. Epub 2014 Dec 19. BMC Genomics. 2014. PMID: 25563301 Free PMC article.

5

Hierarchical cooperation of transcription factors from integration analysis of DNA sequences, ChIP-Seq and ChIA-PET data.

Wang R, Wang Y, Zhang X, Zhang Y, Du X, Fang Y, Li G. Wang R, et al. Among authors: li g. BMC Genomics. 2019 May 8;20(Suppl 3):296. doi: 10.1186/s12864-019-5535-2. BMC Genomics. 2019. PMID: 32039697 Free PMC article.

6

Advances in technologies for 3D genomics research.

Zhang Y, Li G. Zhang Y, et al. Among authors: li g. Sci China Life Sci. 2020 Jun;63(6):811-824. doi: 10.1007/s11427-019-1704-2. Epub 2020 May 8. Sci China Life Sci. 2020. PMID: 32394244 Review.

7

CoolBox: a flexible toolkit for visual analysis of genomics data.

Xu W, Zhong Q, Lin D, Zuo Y, Dai J, Li G, Cao G. Xu W, et al. Among authors: li g. BMC Bioinformatics. 2021 Oct 10;22(1):489. doi: 10.1186/s12859-021-04408-w. BMC Bioinformatics. 2021. PMID: 34629071 Free PMC article.

8

Decoding the plant genome: From epigenome to 3D organization.

Ouyang W, Cao Z, Xiong D, Li G, Li X. Ouyang W, et al. Among authors: li g, li x. J Genet Genomics. 2020 Aug;47(8):425-435. doi: 10.1016/j.jgg.2020.06.007. Epub 2020 Aug 8. J Genet Genomics. 2020. PMID: 33023833 Review.

9

Plant 3D genomics: the exploration and application of chromatin organization.

Pei L, Li G, Lindsey K, Zhang X, Wang M. Pei L, et al. Among authors: li g. New Phytol. 2021 Jun;230(5):1772-1786. doi: 10.1111/nph.17262. Epub 2021 Mar 4. New Phytol. 2021. PMID: 33560539 Free PMC article. Review.

10

Gene co-expression network analysis reveals key pathways and hub genes in Chinese cabbage (Brassica rapa L.) during vernalization.

Dai Y, Sun X, Wang C, Li F, Zhang S, Zhang H, Li G, Yuan L, Chen G, Sun R, Zhang S. Dai Y, et al. Among authors: li f, li g. BMC Genomics. 2021 Apr 6;22(1):236. doi: 10.1186/s12864-021-07510-8. BMC Genomics. 2021. PMID: 33823810 Free PMC article. Review.

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