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Codiversification of gut microbiota with humans.
Suzuki TA, Fitzstevens JL, Schmidt VT, Enav H, Huus KE, Mbong Ngwese M, Grießhammer A, Pfleiderer A, Adegbite BR, Zinsou JF, Esen M, Velavan TP, Adegnika AA, Song LH, Spector TD, Muehlbauer AL, Marchi N, Kang H, Maier L, Blekhman R, Ségurel L, Ko G, Youngblut ND, Kremsner P, Ley RE. Suzuki TA, et al. Among authors: ley re. Science. 2022 Sep 16;377(6612):1328-1332. doi: 10.1126/science.abm7759. Epub 2022 Sep 15. Science. 2022. PMID: 36108023 Free PMC article.
Human Salivary Amylase Gene Copy Number Impacts Oral and Gut Microbiomes.
Poole AC, Goodrich JK, Youngblut ND, Luque GG, Ruaud A, Sutter JL, Waters JL, Shi Q, El-Hadidi M, Johnson LM, Bar HY, Huson DH, Booth JG, Ley RE. Poole AC, et al. Among authors: ley re. Cell Host Microbe. 2019 Apr 10;25(4):553-564.e7. doi: 10.1016/j.chom.2019.03.001. Cell Host Microbe. 2019. PMID: 30974084 Free article.
Age- and Sex-Dependent Patterns of Gut Microbial Diversity in Human Adults.
de la Cuesta-Zuluaga J, Kelley ST, Chen Y, Escobar JS, Mueller NT, Ley RE, McDonald D, Huang S, Swafford AD, Knight R, Thackray VG. de la Cuesta-Zuluaga J, et al. Among authors: ley re. mSystems. 2019 May 14;4(4):e00261-19. doi: 10.1128/mSystems.00261-19. eCollection 2019 Jul-Aug. mSystems. 2019. PMID: 31098397 Free PMC article.
Vertebrate host phylogeny influences gut archaeal diversity.
Youngblut ND, Reischer GH, Dauser S, Maisch S, Walzer C, Stalder G, Farnleitner AH, Ley RE. Youngblut ND, et al. Among authors: ley re. Nat Microbiol. 2021 Nov;6(11):1443-1454. doi: 10.1038/s41564-021-00980-2. Epub 2021 Oct 26. Nat Microbiol. 2021. PMID: 34702978 Free PMC article.
Interpreting tree ensemble machine learning models with endoR.
Ruaud A, Pfister N, Ley RE, Youngblut ND. Ruaud A, et al. Among authors: ley re. PLoS Comput Biol. 2022 Dec 14;18(12):e1010714. doi: 10.1371/journal.pcbi.1010714. eCollection 2022 Dec. PLoS Comput Biol. 2022. PMID: 36516158 Free PMC article.
142 results