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Optimizing laboratory-based surveillance networks for monitoring multi-genotype or multi-serotype infections.
Cheng Q, Collender PA, Heaney AK, McLoughlin A, Yang Y, Zhang Y, Head JR, Dasan R, Liang S, Lv Q, Liu Y, Yang C, Chang HH, Waller LA, Zelner J, Lewnard JA, Remais JV. Cheng Q, et al. Among authors: lewnard ja. PLoS Comput Biol. 2022 Sep 27;18(9):e1010575. doi: 10.1371/journal.pcbi.1010575. eCollection 2022 Sep. PLoS Comput Biol. 2022. PMID: 36166479 Free PMC article.
Early Evidence of Inactivated Enterovirus 71 Vaccine Impact Against Hand, Foot, and Mouth Disease in a Major Center of Ongoing Transmission in China, 2011-2018: A Longitudinal Surveillance Study.
Head JR, Collender PA, Lewnard JA, Skaff NK, Li L, Cheng Q, Baker JM, Li C, Chen D, Ohringer A, Liang S, Yang C, Hubbard A, Lopman B, Remais JV. Head JR, et al. Among authors: lewnard ja. Clin Infect Dis. 2020 Dec 15;71(12):3088-3095. doi: 10.1093/cid/ciz1188. Clin Infect Dis. 2020. PMID: 31879754 Free PMC article.
The effect of school closures and reopening strategies on COVID-19 infection dynamics in the San Francisco Bay Area: a cross-sectional survey and modeling analysis.
Head JR, Andrejko K, Cheng Q, Collender PA, Phillips S, Boser A, Heaney AK, Hoover CM, Wu SL, Northrup GR, Click K, Harrison R, Lewnard JA, Remais JV. Head JR, et al. Among authors: lewnard ja. medRxiv [Preprint]. 2020 Aug 7:2020.08.06.20169797. doi: 10.1101/2020.08.06.20169797. medRxiv. 2020. PMID: 32793934 Free PMC article. Updated. Preprint.
The DIOS framework for optimizing infectious disease surveillance: Numerical methods for simulation and multi-objective optimization of surveillance network architectures.
Cheng Q, Collender PA, Heaney AK, Li X, Dasan R, Li C, Lewnard JA, Zelner JL, Liang S, Chang HH, Waller LA, Lopman BA, Yang C, Remais JV. Cheng Q, et al. Among authors: lewnard ja. PLoS Comput Biol. 2020 Dec 4;16(12):e1008477. doi: 10.1371/journal.pcbi.1008477. eCollection 2020 Dec. PLoS Comput Biol. 2020. PMID: 33275606 Free PMC article.
School closures reduced social mixing of children during COVID-19 with implications for transmission risk and school reopening policies.
Head JR, Andrejko KL, Cheng Q, Collender PA, Phillips S, Boser A, Heaney AK, Hoover CM, Wu SL, Northrup GR, Click K, Bardach NS, Lewnard JA, Remais JV. Head JR, et al. Among authors: lewnard ja. J R Soc Interface. 2021 Apr;18(177):20200970. doi: 10.1098/rsif.2020.0970. Epub 2021 Apr 14. J R Soc Interface. 2021. PMID: 33849340 Free PMC article.
Heterogeneous susceptibility to rotavirus infection and gastroenteritis in two birth cohort studies: Parameter estimation and epidemiological implications.
Lewnard JA, Lopman BA, Parashar UD, Bennett A, Bar-Zeev N, Cunliffe NA, Samuel P, Guerrero ML, Ruiz-Palacios G, Kang G, Pitzer VE. Lewnard JA, et al. PLoS Comput Biol. 2019 Jul 26;15(7):e1007014. doi: 10.1371/journal.pcbi.1007014. eCollection 2019 Jul. PLoS Comput Biol. 2019. PMID: 31348775 Free PMC article.
Combining genomics and epidemiology to track mumps virus transmission in the United States.
Wohl S, Metsky HC, Schaffner SF, Piantadosi A, Burns M, Lewnard JA, Chak B, Krasilnikova LA, Siddle KJ, Matranga CB, Bankamp B, Hennigan S, Sabina B, Byrne EH, McNall RJ, Shah RR, Qu J, Park DJ, Gharib S, Fitzgerald S, Barreira P, Fleming S, Lett S, Rota PA, Madoff LC, Yozwiak NL, MacInnis BL, Smole S, Grad YH, Sabeti PC. Wohl S, et al. Among authors: lewnard ja. PLoS Biol. 2020 Feb 11;18(2):e3000611. doi: 10.1371/journal.pbio.3000611. eCollection 2020 Feb. PLoS Biol. 2020. PMID: 32045407 Free PMC article.
104 results