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The CATH domain structure database: new protocols and classification levels give a more comprehensive resource for exploring evolution.
Greene LH, Lewis TE, Addou S, Cuff A, Dallman T, Dibley M, Redfern O, Pearl F, Nambudiry R, Reid A, Sillitoe I, Yeats C, Thornton JM, Orengo CA. Greene LH, et al. Among authors: lewis te. Nucleic Acids Res. 2007 Jan;35(Database issue):D291-7. doi: 10.1093/nar/gkl959. Epub 2006 Nov 29. Nucleic Acids Res. 2007. PMID: 17135200 Free PMC article.
Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains.
Lewis TE, Sillitoe I, Andreeva A, Blundell TL, Buchan DW, Chothia C, Cuff A, Dana JM, Filippis I, Gough J, Hunter S, Jones DT, Kelley LA, Kleywegt GJ, Minneci F, Mitchell A, Murzin AG, Ochoa-Montaño B, Rackham OJ, Smith J, Sternberg MJ, Velankar S, Yeats C, Orengo C. Lewis TE, et al. Nucleic Acids Res. 2013 Jan;41(Database issue):D499-507. doi: 10.1093/nar/gks1266. Epub 2012 Nov 30. Nucleic Acids Res. 2013. PMID: 23203986 Free PMC article.
CATH: comprehensive structural and functional annotations for genome sequences.
Sillitoe I, Lewis TE, Cuff A, Das S, Ashford P, Dawson NL, Furnham N, Laskowski RA, Lee D, Lees JG, Lehtinen S, Studer RA, Thornton J, Orengo CA. Sillitoe I, et al. Nucleic Acids Res. 2015 Jan;43(Database issue):D376-81. doi: 10.1093/nar/gku947. Epub 2014 Oct 27. Nucleic Acids Res. 2015. PMID: 25348408 Free PMC article.
Gene3D: Extensive prediction of globular domains in proteins.
Lewis TE, Sillitoe I, Dawson N, Lam SD, Clarke T, Lee D, Orengo C, Lees J. Lewis TE, et al. Nucleic Acids Res. 2018 Jan 4;46(D1):D435-D439. doi: 10.1093/nar/gkx1069. Nucleic Acids Res. 2018. PMID: 29112716 Free PMC article.
The CATH Domain Structure Database and related resources Gene3D and DHS provide comprehensive domain family information for genome analysis.
Pearl F, Todd A, Sillitoe I, Dibley M, Redfern O, Lewis T, Bennett C, Marsden R, Grant A, Lee D, Akpor A, Maibaum M, Harrison A, Dallman T, Reeves G, Diboun I, Addou S, Lise S, Johnston C, Sillero A, Thornton J, Orengo C. Pearl F, et al. Among authors: lewis t. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D247-51. doi: 10.1093/nar/gki024. Nucleic Acids Res. 2005. PMID: 15608188 Free PMC article.
1,891 results