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WOMBAT-P: Benchmarking Label-Free Proteomics Data Analysis Workflows.
Bouyssié D, Altıner P, Capella-Gutierrez S, Fernández JM, Hagemeijer YP, Horvatovich P, Hubálek M, Levander F, Mauri P, Palmblad M, Raffelsberger W, Rodríguez-Navas L, Di Silvestre D, Kunkli BT, Uszkoreit J, Vandenbrouck Y, Vizcaíno JA, Winkelhardt D, Schwämmle V. Bouyssié D, et al. Among authors: levander f. J Proteome Res. 2024 Jan 5;23(1):418-429. doi: 10.1021/acs.jproteome.3c00636. Epub 2023 Dec 1. J Proteome Res. 2024. PMID: 38038272
A community proposal to integrate proteomics activities in ELIXIR.
Vizcaíno JA, Walzer M, Jiménez RC, Bittremieux W, Bouyssié D, Carapito C, Corrales F, Ferro M, Heck AJR, Horvatovich P, Hubalek M, Lane L, Laukens K, Levander F, Lisacek F, Novak P, Palmblad M, Piovesan D, Pühler A, Schwämmle V, Valkenborg D, van Rijswijk M, Vondrasek J, Eisenacher M, Martens L, Kohlbacher O. Vizcaíno JA, et al. Among authors: levander f. F1000Res. 2017 Jun 13;6:ELIXIR-875. doi: 10.12688/f1000research.11751.1. eCollection 2017. F1000Res. 2017. PMID: 28713550 Free PMC article.
The HUPO proteomics standards initiative- mass spectrometry controlled vocabulary.
Mayer G, Montecchi-Palazzi L, Ovelleiro D, Jones AR, Binz PA, Deutsch EW, Chambers M, Kallhardt M, Levander F, Shofstahl J, Orchard S, Vizcaíno JA, Hermjakob H, Stephan C, Meyer HE, Eisenacher M; HUPO-PSI Group. Mayer G, et al. Among authors: levander f. Database (Oxford). 2013 Mar 12;2013:bat009. doi: 10.1093/database/bat009. Print 2013. Database (Oxford). 2013. PMID: 23482073 Free PMC article.
Dinosaur: A Refined Open-Source Peptide MS Feature Detector.
Teleman J, Chawade A, Sandin M, Levander F, Malmström J. Teleman J, et al. Among authors: levander f. J Proteome Res. 2016 Jul 1;15(7):2143-51. doi: 10.1021/acs.jproteome.6b00016. Epub 2016 Jun 8. J Proteome Res. 2016. PMID: 27224449 Free PMC article.
Targeted Proteomics Approach for Precision Plant Breeding.
Chawade A, Alexandersson E, Bengtsson T, Andreasson E, Levander F. Chawade A, et al. Among authors: levander f. J Proteome Res. 2016 Feb 5;15(2):638-46. doi: 10.1021/acs.jproteome.5b01061. Epub 2016 Jan 12. J Proteome Res. 2016. PMID: 26704985 Free article.
88 results