Lemey P - Search Results

1

Scalable Bayesian Divergence Time Estimation With Ratio Transformations.

Ji X, Fisher AA, Su S, Thorne JL, Potter B, Lemey P, Baele G, Suchard MA. Ji X, et al. Among authors: lemey p. Syst Biol. 2023 Nov 1;72(5):1136-1153. doi: 10.1093/sysbio/syad039. Syst Biol. 2023. PMID: 37458991

2

Accelerating Bayesian inference of dependency between mixed-type biological traits.

Zhang Z, Nishimura A, Trovão NS, Cherry JL, Holbrook AJ, Ji X, Lemey P, Suchard MA. Zhang Z, et al. Among authors: lemey p. PLoS Comput Biol. 2023 Aug 28;19(8):e1011419. doi: 10.1371/journal.pcbi.1011419. eCollection 2023 Aug. PLoS Comput Biol. 2023. PMID: 37639445 Free PMC article.

3

Influenza A viruses in gulls in landfills and freshwater habitats in Minnesota, United States.

Rasmussen EA, Czaja A, Cuthbert FJ, Tan GS, Lemey P, Nelson MI, Culhane MR. Rasmussen EA, et al. Among authors: lemey p. Front Genet. 2023 May 9;14:1172048. doi: 10.3389/fgene.2023.1172048. eCollection 2023. Front Genet. 2023. PMID: 37229191 Free PMC article.

4

Reconstruction of SARS-CoV-2 outbreaks in a primary school using epidemiological and genomic data.

Kremer C, Torneri A, Libin PJK, Meex C, Hayette MP, Bontems S, Durkin K, Artesi M, Bours V, Lemey P, Darcis G, Hens N, Meuris C. Kremer C, et al. Among authors: lemey p. Epidemics. 2023 Sep;44:100701. doi: 10.1016/j.epidem.2023.100701. Epub 2023 Jun 16. Epidemics. 2023. PMID: 37379776 Free PMC article.

5

Molecular evolution and targeted recombination of SARS-CoV-2 in South Korea.

Demirev AV, Lee K, Bae JY, Park H, Park S, Kim H, Lee J, Cho J, Yang JS, Kim KC, Lee JY, Kim K, Lemey P, Park MS, Kim JI. Demirev AV, et al. Among authors: lemey p. iScience. 2023 Aug 22;26(9):107689. doi: 10.1016/j.isci.2023.107689. eCollection 2023 Sep 15. iScience. 2023. PMID: 37680469 Free PMC article.

6

High-Level Drug-Resistant Mutations among HIV-1 Subtype A6 and CRF02_AG in Kazakhstan.

Sanaubarova A, Pujol-Hodge E, Dzissyuk N, Lemey P, Vermund SH, Leigh Brown AJ, Ali S. Sanaubarova A, et al. Among authors: lemey p. Viruses. 2023 Jun 21;15(7):1407. doi: 10.3390/v15071407. Viruses. 2023. PMID: 37515095 Free PMC article.

7

Lethal Respiratory Syncytial Virus in Zambia Is Sensitive to Long-acting Monoclonal Antibodies.

Langedijk AC, Vrancken B, Lebbink RJ, Evers A, Pieciak RC, Lemey P, Bont LJ, Gill CJ. Langedijk AC, et al. Among authors: lemey p. Pediatr Infect Dis J. 2023 Nov 1;42(11):e421-e423. doi: 10.1097/INF.0000000000004031. Epub 2023 Jul 20. Pediatr Infect Dis J. 2023. PMID: 37523582 No abstract available.

8

Random-effects substitution models for phylogenetics via scalable gradient approximations.

Magee AF, Holbrook AJ, Pekar JE, Caviedes-Solis IW, Matsen Iv FA, Baele G, Wertheim JO, Ji X, Lemey P, Suchard MA. Magee AF, et al. Among authors: lemey p. Syst Biol. 2024 May 7:syae019. doi: 10.1093/sysbio/syae019. Online ahead of print. Syst Biol. 2024. PMID: 38712512

9

The genetic diversity of Nipah virus across spatial scales.

Cortes-Azuero O, Lefrancq N, Nikolay B, McKee C, Cappelle J, Hul V, Ou TP, Hoem T, Lemey P, Rahman MZ, Islam A, Gurley ES, Duong V, Salje H. Cortes-Azuero O, et al. Among authors: lemey p. J Infect Dis. 2024 Apr 29:jiae221. doi: 10.1093/infdis/jiae221. Online ahead of print. J Infect Dis. 2024. PMID: 38682164

10

How fast are viruses spreading in the wild?

Dellicour S, Bastide P, Rocu P, Fargette D, Hardy OJ, Suchard MA, Guindon S, Lemey P. Dellicour S, et al. Among authors: lemey p. bioRxiv [Preprint]. 2024 Apr 11:2024.04.10.588821. doi: 10.1101/2024.04.10.588821. bioRxiv. 2024. PMID: 38645268 Free PMC article. Preprint.

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