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Evolutionary states and trajectories characterized by distinct pathways stratify patients with ovarian high grade serous carcinoma.
Lahtinen A, Lavikka K, Virtanen A, Li Y, Jamalzadeh S, Skorda A, Lauridsen AR, Zhang K, Marchi G, Isoviita VM, Ariotta V, Lehtonen O, Muranen TA, Huhtinen K, Carpén O, Hietanen S, Senkowski W, Kallunki T, Häkkinen A, Hynninen J, Oikkonen J, Hautaniemi S. Lahtinen A, et al. Among authors: lehtonen o. Cancer Cell. 2023 Jun 12;41(6):1103-1117.e12. doi: 10.1016/j.ccell.2023.04.017. Epub 2023 May 18. Cancer Cell. 2023. PMID: 37207655 Free article.
qSNE: quadratic rate t-SNE optimizer with automatic parameter tuning for large datasets.
Häkkinen A, Koiranen J, Casado J, Kaipio K, Lehtonen O, Petrucci E, Hynninen J, Hietanen S, Carpén O, Pasquini L, Biffoni M, Lehtonen R, Hautaniemi S. Häkkinen A, et al. Among authors: lehtonen o. Bioinformatics. 2020 Dec 22;36(20):5086-5092. doi: 10.1093/bioinformatics/btaa637. Bioinformatics. 2020. PMID: 32663244 Free PMC article.
Agile workflow for interactive analysis of mass cytometry data.
Casado J, Lehtonen O, Rantanen V, Kaipio K, Pasquini L, Häkkinen A, Petrucci E, Hynninen J, Hietanen S, Carpén O, Biffoni M, Färkkilä A, Hautaniemi S. Casado J, et al. Among authors: lehtonen o. Bioinformatics. 2021 Jun 9;37(9):1263-1268. doi: 10.1093/bioinformatics/btaa946. Bioinformatics. 2021. PMID: 33135052 Free PMC article.
H&E image analysis pipeline for quantifying morphological features.
Ariotta V, Lehtonen O, Salloum S, Micoli G, Lavikka K, Rantanen V, Hynninen J, Virtanen A, Hautaniemi S. Ariotta V, et al. Among authors: lehtonen o. J Pathol Inform. 2023 Oct 5;14:100339. doi: 10.1016/j.jpi.2023.100339. eCollection 2023. J Pathol Inform. 2023. PMID: 37915837 Free PMC article.
Temporal Relation Between Myocardial Infarction and New-Onset Atrial Fibrillation: Results from a Nationwide Registry Study.
Karlsson E, Kiviniemi T, Halminen O, Lehtonen O, Teppo K, Haukka J, Mustonen P, Putaala J, Linna M, Hartikainen J, Airaksinen KEJ, Lehto M; FinACAF Study Group. Karlsson E, et al. Among authors: lehtonen o. Am J Cardiol. 2024 Jan 15;211:49-56. doi: 10.1016/j.amjcard.2023.10.071. Epub 2023 Nov 3. Am J Cardiol. 2024. PMID: 37924921 Free article.
Association of income and educational levels with adherence to direct oral anticoagulant therapy in patients with incident atrial fibrillation: A Finnish nationwide cohort study.
Teppo K, Jaakkola J, Biancari F, Halminen O, Linna M, Haukka J, Putaala J, Tiili P, Lehtonen O, Niemi M, Mustonen P, Kinnunen J, Hartikainen J, Airaksinen KEJ, Lehto M. Teppo K, et al. Among authors: lehtonen o. Pharmacol Res Perspect. 2022 Jun;10(3):e00961. doi: 10.1002/prp2.961. Pharmacol Res Perspect. 2022. PMID: 35599338 Free PMC article.
121 results