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aaHash: recursive amino acid sequence hashing.
Wong J, Kazemi P, Coombe L, Warren RL, Birol I. Wong J, et al. Among authors: coombe l. Bioinform Adv. 2023 Nov 11;3(1):vbad162. doi: 10.1093/bioadv/vbad162. eCollection 2023. Bioinform Adv. 2023. PMID: 38023332 Free PMC article.
Assembly and annotation of the black spruce genome provide insights on spruce phylogeny and evolution of stress response.
Lo T, Coombe L, Gagalova KK, Marr A, Warren RL, Kirk H, Pandoh P, Zhao Y, Moore RA, Mungall AJ, Ritland C, Pavy N, Jones SJM, Bohlmann J, Bousquet J, Birol I, Thomson A. Lo T, et al. Among authors: coombe l. G3 (Bethesda). 2023 Dec 29;14(1):jkad247. doi: 10.1093/g3journal/jkad247. G3 (Bethesda). 2023. PMID: 37875130 Free PMC article.
aaHash: recursive amino acid sequence hashing.
Wong J, Kazemi P, Coombe L, Warren RL, Birol I. Wong J, et al. Among authors: coombe l. bioRxiv [Preprint]. 2023 May 10:2023.05.08.539909. doi: 10.1101/2023.05.08.539909. bioRxiv. 2023. PMID: 37214907 Free PMC article. Updated. Preprint.
The western redcedar genome reveals low genetic diversity in a self-compatible conifer.
Shalev TJ, Gamal El-Dien O, Yuen MMS, Shengqiang S, Jackman SD, Warren RL, Coombe L, van der Merwe L, Stewart A, Boston LB, Plott C, Jenkins J, He G, Yan J, Yan M, Guo J, Breinholt JW, Neves LG, Grimwood J, Rieseberg LH, Schmutz J, Birol I, Kirst M, Yanchuk AD, Ritland C, Russell JH, Bohlmann J. Shalev TJ, et al. Among authors: coombe l. Genome Res. 2022 Oct;32(10):1952-1964. doi: 10.1101/gr.276358.121. Epub 2022 Sep 15. Genome Res. 2022. PMID: 36109148 Free PMC article.
Spruce giga-genomes: structurally similar yet distinctive with differentially expanding gene families and rapidly evolving genes.
Gagalova KK, Warren RL, Coombe L, Wong J, Nip KM, Yuen MMS, Whitehill JGA, Celedon JM, Ritland C, Taylor GA, Cheng D, Plettner P, Hammond SA, Mohamadi H, Zhao Y, Moore RA, Mungall AJ, Boyle B, Laroche J, Cottrell J, Mackay JJ, Lamothe M, Gérardi S, Isabel N, Pavy N, Jones SJM, Bohlmann J, Bousquet J, Birol I. Gagalova KK, et al. Among authors: coombe l. Plant J. 2022 Sep;111(5):1469-1485. doi: 10.1111/tpj.15889. Epub 2022 Jul 16. Plant J. 2022. PMID: 35789009 Free article.
27 results