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BrAPI-an application programming interface for plant breeding applications.
Selby P, Abbeloos R, Backlund JE, Basterrechea Salido M, Bauchet G, Benites-Alfaro OE, Birkett C, Calaminos VC, Carceller P, Cornut G, Vasques Costa B, Edwards JD, Finkers R, Yanxin Gao S, Ghaffar M, Glaser P, Guignon V, Hok P, Kilian A, König P, Lagare JEB, Lange M, Laporte MA, Larmande P, LeBauer DS, Lyon DA, Marshall DS, Matthews D, Milne I, Mistry N, Morales N, Mueller LA, Neveu P, Papoutsoglou E, Pearce B, Perez-Masias I, Pommier C, Ramírez-González RH, Rathore A, Raquel AM, Raubach S, Rife T, Robbins K, Rouard M, Sarma C, Scholz U, Sempéré G, Shaw PD, Simon R, Soldevilla N, Stephen G, Sun Q, Tovar C, Uszynski G, Verouden M; BrAPI consortium. Selby P, et al. Among authors: larmande p. Bioinformatics. 2019 Oct 15;35(20):4147-4155. doi: 10.1093/bioinformatics/btz190. Bioinformatics. 2019. PMID: 30903186 Free PMC article.
Gigwa v2-Extended and improved genotype investigator.
Sempéré G, Pétel A, Rouard M, Frouin J, Hueber Y, De Bellis F, Larmande P. Sempéré G, et al. Among authors: larmande p. Gigascience. 2019 May 1;8(5):giz051. doi: 10.1093/gigascience/giz051. Gigascience. 2019. PMID: 31077313 Free PMC article.
Benchmarking database systems for Genomic Selection implementation.
Nti-Addae Y, Matthews D, Ulat VJ, Syed R, Sempéré G, Pétel A, Renner J, Larmande P, Guignon V, Jones E, Robbins K. Nti-Addae Y, et al. Among authors: larmande p. Database (Oxford). 2019 Jan 1;2019:baz096. doi: 10.1093/database/baz096. Database (Oxford). 2019. PMID: 31508797 Free PMC article.
Managing High-Density Genotyping Data with Gigwa.
Sempéré G, Larmande P, Rouard M. Sempéré G, et al. Among authors: larmande p. Methods Mol Biol. 2022;2443:415-427. doi: 10.1007/978-1-0716-2067-0_21. Methods Mol Biol. 2022. PMID: 35037218
Gigwa-Genotype investigator for genome-wide analyses.
Sempéré G, Philippe F, Dereeper A, Ruiz M, Sarah G, Larmande P. Sempéré G, et al. Among authors: larmande p. Gigascience. 2016 Jun 6;5:25. doi: 10.1186/s13742-016-0131-8. Gigascience. 2016. PMID: 27267926 Free PMC article.
Developing data interoperability using standards: A wheat community use case.
Dzale Yeumo E, Alaux M, Arnaud E, Aubin S, Baumann U, Buche P, Cooper L, Ćwiek-Kupczyńska H, Davey RP, Fulss RA, Jonquet C, Laporte MA, Larmande P, Pommier C, Protonotarios V, Reverte C, Shrestha R, Subirats I, Venkatesan A, Whan A, Quesneville H. Dzale Yeumo E, et al. Among authors: larmande p. F1000Res. 2017 Oct 16;6:1843. doi: 10.12688/f1000research.12234.2. eCollection 2017. F1000Res. 2017. PMID: 29333241 Free PMC article.
Erratum to: Gigwa-Genotype investigator for genome-wide analyses.
Sempéré G, Philippe F, Dereeper A, Ruiz M, Sarah G, Larmande P. Sempéré G, et al. Among authors: larmande p. Gigascience. 2016 Nov 2;5(1):48. doi: 10.1186/s13742-016-0153-2. Gigascience. 2016. PMID: 27806726 Free PMC article. No abstract available.
Rice Galaxy: an open resource for plant science.
Juanillas V, Dereeper A, Beaume N, Droc G, Dizon J, Mendoza JR, Perdon JP, Mansueto L, Triplett L, Lang J, Zhou G, Ratharanjan K, Plale B, Haga J, Leach JE, Ruiz M, Thomson M, Alexandrov N, Larmande P, Kretzschmar T, Mauleon RP. Juanillas V, et al. Among authors: larmande p. Gigascience. 2019 May 1;8(5):giz028. doi: 10.1093/gigascience/giz028. Gigascience. 2019. PMID: 31107941 Free PMC article.
109 results