Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

Search Results

17 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Results By Year timeline is not available.
Page 1
BioJava 5: A community driven open-source bioinformatics library.
Lafita A, Bliven S, Prlić A, Guzenko D, Rose PW, Bradley A, Pavan P, Myers-Turnbull D, Valasatava Y, Heuer M, Larson M, Burley SK, Duarte JM. Lafita A, et al. PLoS Comput Biol. 2019 Feb 8;15(2):e1006791. doi: 10.1371/journal.pcbi.1006791. eCollection 2019 Feb. PLoS Comput Biol. 2019. PMID: 30735498 Free PMC article.
Automated evaluation of quaternary structures from protein crystals.
Bliven S, Lafita A, Parker A, Capitani G, Duarte JM. Bliven S, et al. Among authors: lafita a. PLoS Comput Biol. 2018 Apr 30;14(4):e1006104. doi: 10.1371/journal.pcbi.1006104. eCollection 2018 Apr. PLoS Comput Biol. 2018. PMID: 29708963 Free PMC article.
Assessment of protein assembly prediction in CASP13.
Guzenko D, Lafita A, Monastyrskyy B, Kryshtafovych A, Duarte JM. Guzenko D, et al. Among authors: lafita a. Proteins. 2019 Dec;87(12):1190-1199. doi: 10.1002/prot.25795. Epub 2019 Aug 27. Proteins. 2019. PMID: 31374138 Free PMC article.
Assessment of protein assembly prediction in CASP12.
Lafita A, Bliven S, Kryshtafovych A, Bertoni M, Monastyrskyy B, Duarte JM, Schwede T, Capitani G. Lafita A, et al. Proteins. 2018 Mar;86 Suppl 1(Suppl 1):247-256. doi: 10.1002/prot.25408. Epub 2017 Nov 8. Proteins. 2018. PMID: 29071742 Free PMC article.
Biological and functional relevance of CASP predictions.
Liu T, Ish-Shalom S, Torng W, Lafita A, Bock C, Mort M, Cooper DN, Bliven S, Capitani G, Mooney SD, Altman RB. Liu T, et al. Among authors: lafita a. Proteins. 2018 Mar;86 Suppl 1(Suppl Suppl 1):374-386. doi: 10.1002/prot.25396. Epub 2017 Oct 17. Proteins. 2018. PMID: 28975675 Free PMC article.
TADOSS: computational estimation of tandem domain swap stability.
Lafita A, Tian P, Best RB, Bateman A. Lafita A, et al. Bioinformatics. 2019 Jul 15;35(14):2507-2508. doi: 10.1093/bioinformatics/bty974. Bioinformatics. 2019. PMID: 30500878 Free PMC article.
Several molecular explanations have been put forward, such as swapping of adjacent domains, but there is a lack of computational tools to systematically analyze them. We present the TAndem DOmain Swap Stability predictor (TADOSS), a method to computationally estimat …
Several molecular explanations have been put forward, such as swapping of adjacent domains, but there is a lack of computational tool …
Periscope Proteins are variable-length regulators of bacterial cell surface interactions.
Whelan F, Lafita A, Gilburt J, Dégut C, Griffiths SC, Jenkins HT, St John AN, Paci E, Moir JWB, Plevin MJ, Baumann CG, Bateman A, Potts JR. Whelan F, et al. Among authors: lafita a. Proc Natl Acad Sci U S A. 2021 Jun 8;118(23):e2101349118. doi: 10.1073/pnas.2101349118. Proc Natl Acad Sci U S A. 2021. PMID: 34074781 Free PMC article.
Discovery of fibrillar adhesins across bacterial species.
Monzon V, Lafita A, Bateman A. Monzon V, et al. Among authors: lafita a. BMC Genomics. 2021 Jul 18;22(1):550. doi: 10.1186/s12864-021-07586-2. BMC Genomics. 2021. PMID: 34275445 Free PMC article.
Defining the remarkable structural malleability of a bacterial surface protein Rib domain implicated in infection.
Whelan F, Lafita A, Griffiths SC, Cooper REM, Whittingham JL, Turkenburg JP, Manfield IW, St John AN, Paci E, Bateman A, Potts JR. Whelan F, et al. Among authors: lafita a. Proc Natl Acad Sci U S A. 2019 Dec 26;116(52):26540-26548. doi: 10.1073/pnas.1911776116. Epub 2019 Dec 9. Proc Natl Acad Sci U S A. 2019. PMID: 31818940 Free PMC article.
17 results