Löytynoja A - Search Results

1

Genetic population structure constrains local adaptation in sticklebacks.

Kemppainen P, Li Z, Rastas P, Löytynoja A, Fang B, Yang J, Guo B, Shikano T, Merilä J. Kemppainen P, et al. Among authors: loytynoja a. Mol Ecol. 2021 May;30(9):1946-1961. doi: 10.1111/mec.15808. Epub 2021 Feb 10. Mol Ecol. 2021. PMID: 33464655

2

Bracketing phenogenotypic limits of mammalian hybridization.

Savriama Y, Valtonen M, Kammonen JI, Rastas P, Smolander OP, Lyyski A, Häkkinen TJ, Corfe IJ, Gerber S, Salazar-Ciudad I, Paulin L, Holm L, Löytynoja A, Auvinen P, Jernvall J. Savriama Y, et al. Among authors: loytynoja a. R Soc Open Sci. 2018 Nov 28;5(11):180903. doi: 10.1098/rsos.180903. eCollection 2018 Nov. R Soc Open Sci. 2018. PMID: 30564397 Free PMC article.

3

A High-Quality Assembly of the Nine-Spined Stickleback (Pungitius pungitius) Genome.

Varadharajan S, Rastas P, Löytynoja A, Matschiner M, Calboli FCF, Guo B, Nederbragt AJ, Jakobsen KS, Merilä J. Varadharajan S, et al. Among authors: loytynoja a. Genome Biol Evol. 2019 Nov 1;11(11):3291-3308. doi: 10.1093/gbe/evz240. Genome Biol Evol. 2019. PMID: 31687752 Free PMC article.

4

Effects of marker type and filtering criteria on Q _ST-F _ST comparisons.

Li Z, Löytynoja A, Fraimout A, Merilä J. Li Z, et al. Among authors: loytynoja a. R Soc Open Sci. 2019 Nov 6;6(11):190666. doi: 10.1098/rsos.190666. eCollection 2019 Nov. R Soc Open Sci. 2019. PMID: 31827824 Free PMC article.

5

Automated improvement of stickleback reference genome assemblies with Lep-Anchor software.

Kivikoski M, Rastas P, Löytynoja A, Merilä J. Kivikoski M, et al. Among authors: loytynoja a. Mol Ecol Resour. 2021 Aug;21(6):2166-2176. doi: 10.1111/1755-0998.13404. Epub 2021 May 12. Mol Ecol Resour. 2021. PMID: 33955177

6

Complex population history affects admixture analyses in nine-spined sticklebacks.

Feng X, Merilä J, Löytynoja A. Feng X, et al. Among authors: loytynoja a. Mol Ecol. 2022 Oct;31(20):5386-5401. doi: 10.1111/mec.16651. Epub 2022 Sep 27. Mol Ecol. 2022. PMID: 35962788 Free PMC article.

7

Predicting recombination frequency from map distance.

Kivikoski M, Rastas P, Löytynoja A, Merilä J. Kivikoski M, et al. Among authors: loytynoja a. Heredity (Edinb). 2023 Mar;130(3):114-121. doi: 10.1038/s41437-022-00585-3. Epub 2022 Dec 24. Heredity (Edinb). 2023. PMID: 36566319 Free PMC article.

8

Fragmented habitat compensates for the adverse effects of genetic bottleneck.

Löytynoja A, Rastas P, Valtonen M, Kammonen J, Holm L, Olsen MT, Paulin L, Jernvall J, Auvinen P. Löytynoja A, et al. Curr Biol. 2023 Mar 27;33(6):1009-1018.e7. doi: 10.1016/j.cub.2023.01.040. Epub 2023 Feb 22. Curr Biol. 2023. PMID: 36822202 Free article.

9

An evolutionarily distinct ringed seal in the Ilulissat Icefjord.

Rosing-Asvid A, Löytynoja A, Momigliano P, Hansen RG, Scharff-Olsen CH, Valtonen M, Kammonen J, Dietz R, Rigét FF, Ferguson SH, Lydersen C, Kovacs KM, Holland DM, Jernvall J, Auvinen P, Tange Olsen M. Rosing-Asvid A, et al. Among authors: loytynoja a. Mol Ecol. 2023 Nov;32(22):5932-5943. doi: 10.1111/mec.17163. Epub 2023 Oct 19. Mol Ecol. 2023. PMID: 37855154

10

Phylogeny-aware alignment with PRANK.

Löytynoja A. Löytynoja A. Methods Mol Biol. 2014;1079:155-70. doi: 10.1007/978-1-62703-646-7_10. Methods Mol Biol. 2014. PMID: 24170401

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