Kumar R - Search Results

1

Metagenomics approach to the study of the gut microbiome structure and function in zebrafish Danio rerio fed with gluten formulated diet.

Koo H, Hakim JA, Powell ML, Kumar R, Eipers PG, Morrow CD, Crowley M, Lefkowitz EJ, Watts SA, Bej AK. Koo H, et al. Among authors: kumar r. J Microbiol Methods. 2017 Apr;135:69-76. doi: 10.1016/j.mimet.2017.01.016. Epub 2017 Feb 3. J Microbiol Methods. 2017. PMID: 28167213 Free PMC article.

2

The gut microbiome of the sea urchin, Lytechinus variegatus, from its natural habitat demonstrates selective attributes of microbial taxa and predictive metabolic profiles.

Hakim JA, Koo H, Kumar R, Lefkowitz EJ, Morrow CD, Powell ML, Watts SA, Bej AK. Hakim JA, et al. Among authors: kumar r. FEMS Microbiol Ecol. 2016 Sep;92(9):fiw146. doi: 10.1093/femsec/fiw146. Epub 2016 Jul 1. FEMS Microbiol Ecol. 2016. PMID: 27368709 Free PMC article.

3

Getting started with microbiome analysis: sample acquisition to bioinformatics.

Kumar R, Eipers P, Little RB, Crowley M, Crossman DK, Lefkowitz EJ, Morrow CD. Kumar R, et al. Curr Protoc Hum Genet. 2014 Jul 14;82:18.8.1-18.8.29. doi: 10.1002/0471142905.hg1808s82. Curr Protoc Hum Genet. 2014. PMID: 25042718 Free PMC article.

4

Fecal metabolomics in pediatric spondyloarthritis implicate decreased metabolic diversity and altered tryptophan metabolism as pathogenic factors.

Stoll ML, Kumar R, Lefkowitz EJ, Cron RQ, Morrow CD, Barnes S. Stoll ML, et al. Among authors: kumar r. Genes Immun. 2016 Dec;17(7):400-405. doi: 10.1038/gene.2016.38. Epub 2016 Oct 27. Genes Immun. 2016. PMID: 27786174 Free PMC article.

5

An abundance of Epsilonproteobacteria revealed in the gut microbiome of the laboratory cultured sea urchin, Lytechinus variegatus.

Hakim JA, Koo H, Dennis LN, Kumar R, Ptacek T, Morrow CD, Lefkowitz EJ, Powell ML, Bej AK, Watts SA. Hakim JA, et al. Among authors: kumar r. Front Microbiol. 2015 Oct 13;6:1047. doi: 10.3389/fmicb.2015.01047. eCollection 2015. Front Microbiol. 2015. PMID: 26528245 Free PMC article.

6

Colonization potential to reconstitute a microbe community in patients detected early after fecal microbe transplant for recurrent C. difficile.

Kumar R, Maynard CL, Eipers P, Goldsmith KT, Ptacek T, Grubbs JA, Dixon P, Howard D, Crossman DK, Crowley MR, Benjamin WH Jr, Lefkowitz EJ, Weaver CT, Rodriguez JM, Morrow CD. Kumar R, et al. BMC Microbiol. 2016 Jan 13;16:5. doi: 10.1186/s12866-015-0622-2. BMC Microbiol. 2016. PMID: 26758906 Free PMC article. Clinical Trial.

7

Gut microbiota composition associated with alterations in cardiorespiratory fitness and psychosocial outcomes among breast cancer survivors.

Paulsen JA, Ptacek TS, Carter SJ, Liu N, Kumar R, Hyndman L, Lefkowitz EJ, Morrow CD, Rogers LQ. Paulsen JA, et al. Among authors: kumar r. Support Care Cancer. 2017 May;25(5):1563-1570. doi: 10.1007/s00520-016-3568-5. Epub 2017 Jan 7. Support Care Cancer. 2017. PMID: 28064384 Free PMC article.

8

Identification of donor microbe species that colonize and persist long term in the recipient after fecal transplant for recurrent Clostridium difficile.

Kumar R, Yi N, Zhi D, Eipers P, Goldsmith KT, Dixon P, Crossman DK, Crowley MR, Lefkowitz EJ, Rodriguez JM, Morrow CD. Kumar R, et al. NPJ Biofilms Microbiomes. 2017 Jun 7;3:12. doi: 10.1038/s41522-017-0020-7. eCollection 2017. NPJ Biofilms Microbiomes. 2017. PMID: 28649413 Free PMC article.

9

Age and fecal microbial strain-specific differences in patients with spondyloarthritis.

Stoll ML, Weiss PF, Weiss JE, Nigrovic PA, Edelheit BS, Bridges SL Jr, Danila MI, Spencer CH, Punaro MG, Schikler K, Reiff A, Kumar R, Cron RQ, Morrow CD, Lefkowitz EJ. Stoll ML, et al. Among authors: kumar r. Arthritis Res Ther. 2018 Jan 30;20(1):14. doi: 10.1186/s13075-018-1510-6. Arthritis Res Ther. 2018. PMID: 29382366 Free PMC article.

10

In Silico and Experimental Evaluation of Primer Sets for Species-Level Resolution of the Vaginal Microbiota Using 16S Ribosomal RNA Gene Sequencing.

Van Der Pol WJ, Kumar R, Morrow CD, Blanchard EE, Taylor CM, Martin DH, Lefkowitz EJ, Muzny CA. Van Der Pol WJ, et al. Among authors: kumar r. J Infect Dis. 2019 Jan 7;219(2):305-314. doi: 10.1093/infdis/jiy508. J Infect Dis. 2019. PMID: 30535155 Free PMC article.

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