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Robustness of Massively Parallel Sequencing Platforms.
PLoS One. 2015 Sep 18;10(9):e0138259. doi: 10.1371/journal.pone.0138259. eCollection 2015.
PLoS One. 2015.
PMID: 26382624
Free PMC article.
A System Architecture for Efficient Transmission of Massive DNA Sequencing Data.
Sağiroğlu MŞ, Külekcİ MO.
Sağiroğlu MŞ, et al. Among authors: kulekci mo.
J Comput Biol. 2017 Nov;24(11):1081-1088. doi: 10.1089/cmb.2017.0016. Epub 2017 Apr 17.
J Comput Biol. 2017.
PMID: 28414531
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Sketching algorithms for genomic data analysis and querying in a secure enclave.
Kockan C, Zhu K, Dokmai N, Karpov N, Kulekci MO, Woodruff DP, Sahinalp SC.
Kockan C, et al. Among authors: kulekci mo.
Nat Methods. 2020 Mar;17(3):295-301. doi: 10.1038/s41592-020-0761-8. Epub 2020 Mar 4.
Nat Methods. 2020.
PMID: 32132732
Free PMC article.
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A Two-Level Scheme for Quality Score Compression.
Voges J, Fotouhi A, Ostermann J, Külekci MO.
Voges J, et al. Among authors: kulekci mo.
J Comput Biol. 2018 Oct;25(10):1141-1151. doi: 10.1089/cmb.2018.0065. Epub 2018 Jul 30.
J Comput Biol. 2018.
PMID: 30059248
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Efficient maximal repeat finding using the burrows-wheeler transform and wavelet tree.
Külekci MO, Vitter JS, Xu B.
Külekci MO, et al.
IEEE/ACM Trans Comput Biol Bioinform. 2012;9(2):421-9. doi: 10.1109/TCBB.2011.127. Epub 2011 Sep 27.
IEEE/ACM Trans Comput Biol Bioinform. 2012.
PMID: 21968959
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