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Introgression and disruption of migration routes have shaped the genetic integrity of wildebeest populations.
Liu X, Lin L, Sinding MS, Bertola LD, Hanghøj K, Quinn L, Garcia-Erill G, Rasmussen MS, Schubert M, Pečnerová P, Balboa RF, Li Z, Heaton MP, Smith TPL, Pinto RR, Wang X, Kuja J, Brüniche-Olsen A, Meisner J, Santander CG, Ogutu JO, Masembe C, da Fonseca RR, Muwanika V, Siegismund HR, Albrechtsen A, Moltke I, Heller R. Liu X, et al. Among authors: kuja j. Nat Commun. 2024 Apr 12;15(1):2921. doi: 10.1038/s41467-024-47015-y. Nat Commun. 2024. PMID: 38609362 Free PMC article.
Giraffe lineages are shaped by major ancient admixture events.
Bertola LD, Quinn L, Hanghøj K, Garcia-Erill G, Rasmussen MS, Balboa RF, Meisner J, Bøggild T, Wang X, Lin L, Nursyifa C, Liu X, Li Z, Chege M, Moodley Y, Brüniche-Olsen A, Kuja J, Schubert M, Agaba M, Santander CG, Sinding MS, Muwanika V, Masembe C, Siegismund HR, Moltke I, Albrechtsen A, Heller R. Bertola LD, et al. Among authors: kuja j. Curr Biol. 2024 Apr 8;34(7):1576-1586.e5. doi: 10.1016/j.cub.2024.02.051. Epub 2024 Mar 12. Curr Biol. 2024. PMID: 38479386 Free article.
African bushpigs exhibit porous species boundaries and appeared in Madagascar concurrently with human arrival.
Balboa RF, Bertola LD, Brüniche-Olsen A, Rasmussen MS, Liu X, Besnard G, Salmona J, Santander CG, He S, Zinner D, Pedrono M, Muwanika V, Masembe C, Schubert M, Kuja J, Quinn L, Garcia-Erill G, Stæger FF, Rakotoarivony R, Henrique M, Lin L, Wang X, Heaton MP, Smith TPL, Hanghøj K, Sinding MS, Atickem A, Chikhi L, Roos C, Gaubert P, Siegismund HR, Moltke I, Albrechtsen A, Heller R. Balboa RF, et al. Among authors: kuja j. Nat Commun. 2024 Jan 3;15(1):172. doi: 10.1038/s41467-023-44105-1. Nat Commun. 2024. PMID: 38172616 Free PMC article.
Bridging the gap in African biodiversity genomics and bioinformatics.
Sharaf A, Ndiribe CC, Omotoriogun TC, Abueg L, Badaoui B, Badiane Markey FJ, Beedessee G, Diouf D, Duru VC, Ebuzome C, Eziuzor SC, Jaufeerally Fakim Y, Formenti G, Ghanmi N, Guerfali FZ, Houaga I, Ideozu JE, Katee SM, Khayi S, Kuja JO, Kwon-Ndung EH, Marks RA, Moila AM, Mungloo-Dilmohamud Z, Muzemil S, Nigussie H, Osuji JO, Ras V, Tchiechoua YH, Zoclanclounon YAB, Tolley KA, Ziyomo C, Mapholi N, Muigai AWT, Djikeng A, Ebenezer TE. Sharaf A, et al. Among authors: kuja jo. Nat Biotechnol. 2023 Sep;41(9):1348-1354. doi: 10.1038/s41587-023-01933-2. Nat Biotechnol. 2023. PMID: 37699986 No abstract available.
Chromosome-scale haplotype-resolved pangenomics.
Garg S, Balboa R, Kuja J. Garg S, et al. Among authors: kuja j. Trends Genet. 2022 Nov;38(11):1103-1107. doi: 10.1016/j.tig.2022.06.011. Epub 2022 Jul 8. Trends Genet. 2022. PMID: 35817620
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