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Snapper: high-sensitive detection of methylation motifs based on Oxford Nanopore reads.
Bioinformatics. 2023 Nov 1;39(11):btad702. doi: 10.1093/bioinformatics/btad702.
Bioinformatics. 2023.
PMID: 37982752
Free PMC article.
BioCAT: Search for biosynthetic gene clusters producing nonribosomal peptides with known structure.
Konanov DN, Krivonos DV, Ilina EN, Babenko VV.
Konanov DN, et al. Among authors: krivonos dv.
Comput Struct Biotechnol J. 2022 Mar 4;20:1218-1226. doi: 10.1016/j.csbj.2022.02.013. eCollection 2022.
Comput Struct Biotechnol J. 2022.
PMID: 35317229
Free PMC article.
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FunFun: ITS-based functional annotator of fungal communities.
Krivonos DV, Konanov DN, Ilina EN.
Krivonos DV, et al.
Ecol Evol. 2023 Mar 8;13(3):e9874. doi: 10.1002/ece3.9874. eCollection 2023 Mar.
Ecol Evol. 2023.
PMID: 36911300
Free PMC article.
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UniqPy: A tool for estimation of short-chain fatty acids composition by gas-chromatography/mass-spectrometry with headspace extraction.
Konanov DN, Zakharzhevskaya NB, Kardonsky DA, Zhgun ES, Kislun YV, Silantyev AS, Shagaleeva OY, Krivonos DV, Troshenkova AN, Govorun VM, Ilina EN.
Konanov DN, et al. Among authors: krivonos dv.
J Pharm Biomed Anal. 2022 Apr 1;212:114681. doi: 10.1016/j.jpba.2022.114681. Epub 2022 Feb 19.
J Pharm Biomed Anal. 2022.
PMID: 35202943
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Structure elucidation and gene cluster of the O-antigen of Shewanella xiamenensis strain DCB-2-1 containing an amide of d-glucuronic acid with d-alanine and its bonding with U, Cr and V.
Kasimova AA, Shashkov AS, Perepelov AV, Babich T, Demina L, Popova N, Krivonos D, Safonov A.
Kasimova AA, et al.
Int J Biol Macromol. 2023 Dec 31;253(Pt 7):127546. doi: 10.1016/j.ijbiomac.2023.127546. Epub 2023 Oct 18.
Int J Biol Macromol. 2023.
PMID: 37863146
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Adaptive Mechanisms of Shewanella xiamenensis DCB 2-1 Metallophilicity.
Abuladze M, Asatiani N, Kartvelishvili T, Krivonos D, Popova N, Safonov A, Sapojnikova N, Yushin N, Zinicovscaia I.
Abuladze M, et al.
Toxics. 2023 Mar 25;11(4):304. doi: 10.3390/toxics11040304.
Toxics. 2023.
PMID: 37112530
Free PMC article.
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