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Ribonanza: deep learning of RNA structure through dual crowdsourcing.
He S, Huang R, Townley J, Kretsch RC, Karagianes TG, Cox DBT, Blair H, Penzar D, Vyaltsev V, Aristova E, Zinkevich A, Bakulin A, Sohn H, Krstevski D, Fukui T, Tatematsu F, Uchida Y, Jang D, Lee JS, Shieh R, Ma T, Martynov E, Shugaev MV, Bukhari HST, Fujikawa K, Onodera K, Henkel C, Ron S, Romano J, Nicol JJ, Nye GP, Wu Y, Choe C, Reade W, Participants E, Das R. He S, et al. Among authors: kretsch rc. bioRxiv [Preprint]. 2024 Feb 27:2024.02.24.581671. doi: 10.1101/2024.02.24.581671. bioRxiv. 2024. PMID: 38464325 Free PMC article. Preprint.
Assessment of three-dimensional RNA structure prediction in CASP15.
Das R, Kretsch RC, Simpkin AJ, Mulvaney T, Pham P, Rangan R, Bu F, Keegan RM, Topf M, Rigden DJ, Miao Z, Westhof E. Das R, et al. Among authors: kretsch rc. bioRxiv [Preprint]. 2023 Oct 3:2023.04.25.538330. doi: 10.1101/2023.04.25.538330. bioRxiv. 2023. PMID: 37162955 Free PMC article. Updated. Preprint.
Cryo-electron Microscopy and Exploratory Antisense Targeting of the 28-kDa Frameshift Stimulation Element from the SARS-CoV-2 RNA Genome.
Zhang K, Zheludev IN, Hagey RJ, Wu MT, Haslecker R, Hou YJ, Kretsch R, Pintilie GD, Rangan R, Kladwang W, Li S, Pham EA, Bernardin-Souibgui C, Baric RS, Sheahan TP, D Souza V, Glenn JS, Chiu W, Das R. Zhang K, et al. bioRxiv [Preprint]. 2020 Jul 20:2020.07.18.209270. doi: 10.1101/2020.07.18.209270. bioRxiv. 2020. PMID: 32743589 Free PMC article. Updated. Preprint.
Assessment of three-dimensional RNA structure prediction in CASP15.
Das R, Kretsch RC, Simpkin AJ, Mulvaney T, Pham P, Rangan R, Bu F, Keegan RM, Topf M, Rigden DJ, Miao Z, Westhof E. Das R, et al. Among authors: kretsch rc. Proteins. 2023 Dec;91(12):1747-1770. doi: 10.1002/prot.26602. Epub 2023 Oct 24. Proteins. 2023. PMID: 37876231
13 results