Krawczyk K - Search Results

1

Data mining patented antibody sequences.

Krawczyk K, Buchanan A, Marcatili P. Krawczyk K, et al. MAbs. 2021 Jan-Dec;13(1):1892366. doi: 10.1080/19420862.2021.1892366. MAbs. 2021. PMID: 33722161 Free PMC article.

2

Looking for therapeutic antibodies in next-generation sequencing repositories.

Krawczyk K, Raybould MIJ, Kovaltsuk A, Deane CM. Krawczyk K, et al. MAbs. 2019 Oct;11(7):1197-1205. doi: 10.1080/19420862.2019.1633884. Epub 2019 Jul 17. MAbs. 2019. PMID: 31216939 Free PMC article.

3

Current advances in biopharmaceutical informatics: guidelines, impact and challenges in the computational developability assessment of antibody therapeutics.

Khetan R, Curtis R, Deane CM, Hadsund JT, Kar U, Krawczyk K, Kuroda D, Robinson SA, Sormanni P, Tsumoto K, Warwicker J, Martin ACR. Khetan R, et al. Among authors: krawczyk k. MAbs. 2022 Jan-Dec;14(1):2020082. doi: 10.1080/19420862.2021.2020082. MAbs. 2022. PMID: 35104168 Free PMC article. Review.

4

Variability analysis of LC-MS experimental factors and their impact on machine learning.

Rehfeldt TG, Krawczyk K, Echers SG, Marcatili P, Palczynski P, Röttger R, Schwämmle V. Rehfeldt TG, et al. Among authors: krawczyk k. Gigascience. 2022 Dec 28;12:giad096. doi: 10.1093/gigascience/giad096. Gigascience. 2022. PMID: 37983748 Free PMC article.

5

LAP: Liability Antibody Profiler by sequence & structural mapping of natural and therapeutic antibodies.

Satława T, Tarkowski M, Wróbel S, Dudzic P, Gawłowski T, Klaus T, Orłowski M, Kostyn A, Kumar S, Buchanan A, Krawczyk K. Satława T, et al. Among authors: krawczyk k. PLoS Comput Biol. 2024 Mar 5;20(3):e1011881. doi: 10.1371/journal.pcbi.1011881. eCollection 2024 Mar. PLoS Comput Biol. 2024. PMID: 38442111 Free PMC article.

6

Computational approaches to therapeutic antibody design: established methods and emerging trends.

Norman RA, Ambrosetti F, Bonvin AMJJ, Colwell LJ, Kelm S, Kumar S, Krawczyk K. Norman RA, et al. Among authors: krawczyk k. Brief Bioinform. 2020 Sep 25;21(5):1549-1567. doi: 10.1093/bib/bbz095. Brief Bioinform. 2020. PMID: 31626279 Free PMC article. Review.

7

SAbPred: a structure-based antibody prediction server.

Dunbar J, Krawczyk K, Leem J, Marks C, Nowak J, Regep C, Georges G, Kelm S, Popovic B, Deane CM. Dunbar J, et al. Among authors: krawczyk k. Nucleic Acids Res. 2016 Jul 8;44(W1):W474-8. doi: 10.1093/nar/gkw361. Epub 2016 Apr 29. Nucleic Acids Res. 2016. PMID: 27131379 Free PMC article.

8

Computational Tools for Aiding Rational Antibody Design.

Krawczyk K, Dunbar J, Deane CM. Krawczyk K, et al. Methods Mol Biol. 2017;1529:399-416. doi: 10.1007/978-1-4939-6637-0_21. Methods Mol Biol. 2017. PMID: 27914064

9

SAbDab: the structural antibody database.

Dunbar J, Krawczyk K, Leem J, Baker T, Fuchs A, Georges G, Shi J, Deane CM. Dunbar J, et al. Among authors: krawczyk k. Nucleic Acids Res. 2014 Jan;42(Database issue):D1140-6. doi: 10.1093/nar/gkt1043. Epub 2013 Nov 8. Nucleic Acids Res. 2014. PMID: 24214988 Free PMC article.

10

Five computational developability guidelines for therapeutic antibody profiling.

Raybould MIJ, Marks C, Krawczyk K, Taddese B, Nowak J, Lewis AP, Bujotzek A, Shi J, Deane CM. Raybould MIJ, et al. Among authors: krawczyk k. Proc Natl Acad Sci U S A. 2019 Mar 5;116(10):4025-4030. doi: 10.1073/pnas.1810576116. Epub 2019 Feb 14. Proc Natl Acad Sci U S A. 2019. PMID: 30765520 Free PMC article.

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