Koropatkin NM - Search Results

1

Sas20 is a highly flexible starch-binding protein in the Ruminococcus bromii cell-surface amylosome.

Cerqueira FM, Photenhauer AL, Doden HL, Brown AN, Abdel-Hamid AM, Moraïs S, Bayer EA, Wawrzak Z, Cann I, Ridlon JM, Hopkins JB, Koropatkin NM. Cerqueira FM, et al. Among authors: koropatkin nm. J Biol Chem. 2022 May;298(5):101896. doi: 10.1016/j.jbc.2022.101896. Epub 2022 Apr 1. J Biol Chem. 2022. PMID: 35378131 Free PMC article.

2

Multidomain Carbohydrate-binding Proteins Involved in Bacteroides thetaiotaomicron Starch Metabolism.

Cameron EA, Maynard MA, Smith CJ, Smith TJ, Koropatkin NM, Martens EC. Cameron EA, et al. Among authors: koropatkin nm. J Biol Chem. 2012 Oct 5;287(41):34614-25. doi: 10.1074/jbc.M112.397380. Epub 2012 Aug 21. J Biol Chem. 2012. PMID: 22910908 Free PMC article.

3

Ruminococcal cellulosome systems from rumen to human.

Ben David Y, Dassa B, Borovok I, Lamed R, Koropatkin NM, Martens EC, White BA, Bernalier-Donadille A, Duncan SH, Flint HJ, Bayer EA, Moraïs S. Ben David Y, et al. Among authors: koropatkin nm. Environ Microbiol. 2015 Sep;17(9):3407-26. doi: 10.1111/1462-2920.12868. Epub 2015 May 7. Environ Microbiol. 2015. PMID: 25845888 Free article.

4

Enzymatic profiling of cellulosomal enzymes from the human gut bacterium, Ruminococcus champanellensis, reveals a fine-tuned system for cohesin-dockerin recognition.

Moraïs S, Ben David Y, Bensoussan L, Duncan SH, Koropatkin NM, Martens EC, Flint HJ, Bayer EA. Moraïs S, et al. Among authors: koropatkin nm. Environ Microbiol. 2016 Feb;18(2):542-56. doi: 10.1111/1462-2920.13047. Epub 2015 Oct 14. Environ Microbiol. 2016. PMID: 26347002 Free article.

5

Unique Organization of Extracellular Amylases into Amylosomes in the Resistant Starch-Utilizing Human Colonic Firmicutes Bacterium Ruminococcus bromii.

Ze X, Ben David Y, Laverde-Gomez JA, Dassa B, Sheridan PO, Duncan SH, Louis P, Henrissat B, Juge N, Koropatkin NM, Bayer EA, Flint HJ. Ze X, et al. Among authors: koropatkin nm. mBio. 2015 Sep 29;6(5):e01058-15. doi: 10.1128/mBio.01058-15. mBio. 2015. PMID: 26419877 Free PMC article.

6

Molecular Dissection of Xyloglucan Recognition in a Prominent Human Gut Symbiont.

Tauzin AS, Kwiatkowski KJ, Orlovsky NI, Smith CJ, Creagh AL, Haynes CA, Wawrzak Z, Brumer H, Koropatkin NM. Tauzin AS, et al. Among authors: koropatkin nm. mBio. 2016 Apr 26;7(2):e02134-15. doi: 10.1128/mBio.02134-15. mBio. 2016. PMID: 27118585 Free PMC article.

7

Lysozyme activity of the Ruminococcus champanellensis cellulosome.

Moraïs S, Cockburn DW, Ben-David Y, Koropatkin NM, Martens EC, Duncan SH, Flint HJ, Mizrahi I, Bayer EA. Moraïs S, et al. Among authors: koropatkin nm. Environ Microbiol. 2016 Dec;18(12):5112-5122. doi: 10.1111/1462-2920.13501. Epub 2016 Sep 7. Environ Microbiol. 2016. PMID: 27555215 Free article.

8

Biochemical and Structural Analyses of Two Cryptic Esterases in Bacteroides intestinalis and their Synergistic Activities with Cognate Xylanases.

Wefers D, Cavalcante JJV, Schendel RR, Deveryshetty J, Wang K, Wawrzak Z, Mackie RI, Koropatkin NM, Cann I. Wefers D, et al. Among authors: koropatkin nm. J Mol Biol. 2017 Aug 4;429(16):2509-2527. doi: 10.1016/j.jmb.2017.06.017. Epub 2017 Jun 29. J Mol Biol. 2017. PMID: 28669823

9

Novel carbohydrate binding modules in the surface anchored α-amylase of Eubacterium rectale provide a molecular rationale for the range of starches used by this organism in the human gut.

Cockburn DW, Suh C, Medina KP, Duvall RM, Wawrzak Z, Henrissat B, Koropatkin NM. Cockburn DW, et al. Among authors: koropatkin nm. Mol Microbiol. 2018 Jan;107(2):249-264. doi: 10.1111/mmi.13881. Epub 2017 Dec 1. Mol Microbiol. 2018. PMID: 29139580 Free PMC article.

10

Sporulation capability and amylosome conservation among diverse human colonic and rumen isolates of the keystone starch-degrader Ruminococcus bromii.

Mukhopadhya I, Moraïs S, Laverde-Gomez J, Sheridan PO, Walker AW, Kelly W, Klieve AV, Ouwerkerk D, Duncan SH, Louis P, Koropatkin N, Cockburn D, Kibler R, Cooper PJ, Sandoval C, Crost E, Juge N, Bayer EA, Flint HJ. Mukhopadhya I, et al. Environ Microbiol. 2018 Jan;20(1):324-336. doi: 10.1111/1462-2920.14000. Epub 2017 Dec 7. Environ Microbiol. 2018. PMID: 29159997 Free PMC article.

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