Kopka J - Search Results

1

Transcriptional, hormonal, and metabolic changes in susceptible grape berries under powdery mildew infection.

Pimentel D, Amaro R, Erban A, Mauri N, Soares F, Rego C, Martínez-Zapater JM, Mithöfer A, Kopka J, Fortes AM. Pimentel D, et al. Among authors: kopka j. J Exp Bot. 2021 Sep 30;72(18):6544-6569. doi: 10.1093/jxb/erab258. J Exp Bot. 2021. PMID: 34106234

2

Metabolome analysis: the potential of in vivo labeling with stable isotopes for metabolite profiling.

Birkemeyer C, Luedemann A, Wagner C, Erban A, Kopka J. Birkemeyer C, et al. Among authors: kopka j. Trends Biotechnol. 2005 Jan;23(1):28-33. doi: 10.1016/j.tibtech.2004.12.001. Trends Biotechnol. 2005. PMID: 15629855 Review.

3

Metabolic labeling of plant cell cultures with K(15)NO3 as a tool for quantitative analysis of proteins and metabolites.

Engelsberger WR, Erban A, Kopka J, Schulze WX. Engelsberger WR, et al. Among authors: kopka j. Plant Methods. 2006 Sep 4;2:14. doi: 10.1186/1746-4811-2-14. Plant Methods. 2006. PMID: 16948866 Free PMC article.

4

Nonsupervised construction and application of mass spectral and retention time index libraries from time-of-flight gas chromatography-mass spectrometry metabolite profiles.

Erban A, Schauer N, Fernie AR, Kopka J. Erban A, et al. Among authors: kopka j. Methods Mol Biol. 2007;358:19-38. doi: 10.1007/978-1-59745-244-1_2. Methods Mol Biol. 2007. PMID: 17035678

5

Hybrid weakness controlled by the dosage-dependent lethal (DL) gene system in common bean (Phaseolus vulgaris) is caused by a shoot-derived inhibitory signal leading to salicylic acid-associated root death.

Hannah MA, Krämer KM, Geffroy V, Kopka J, Blair MW, Erban A, Vallejos CE, Heyer AG, Sanders FET, Millner PA, Pilbeam DJ. Hannah MA, et al. Among authors: kopka j. New Phytol. 2007;176(3):537-549. doi: 10.1111/j.1469-8137.2007.02215.x. Epub 2007 Sep 10. New Phytol. 2007. PMID: 17850251 Free article.

6

Integrative functional genomics of salt acclimatization in the model legume Lotus japonicus.

Sanchez DH, Lippold F, Redestig H, Hannah MA, Erban A, Krämer U, Kopka J, Udvardi MK. Sanchez DH, et al. Among authors: kopka j. Plant J. 2008 Mar;53(6):973-87. doi: 10.1111/j.1365-313X.2007.03381.x. Epub 2007 Nov 29. Plant J. 2008. PMID: 18047558 Free article.

7

TagFinder for the quantitative analysis of gas chromatography--mass spectrometry (GC-MS)-based metabolite profiling experiments.

Luedemann A, Strassburg K, Erban A, Kopka J. Luedemann A, et al. Among authors: kopka j. Bioinformatics. 2008 Mar 1;24(5):732-7. doi: 10.1093/bioinformatics/btn023. Epub 2008 Jan 19. Bioinformatics. 2008. PMID: 18204057

8

Retention index thresholds for compound matching in GC-MS metabolite profiling.

Strehmel N, Hummel J, Erban A, Strassburg K, Kopka J. Strehmel N, et al. Among authors: kopka j. J Chromatogr B Analyt Technol Biomed Life Sci. 2008 Aug 15;871(2):182-90. doi: 10.1016/j.jchromb.2008.04.042. Epub 2008 May 8. J Chromatogr B Analyt Technol Biomed Life Sci. 2008. PMID: 18501684

9

Transcript and metabolite profiling of the adaptive response to mild decreases in oxygen concentration in the roots of arabidopsis plants.

van Dongen JT, Fröhlich A, Ramírez-Aguilar SJ, Schauer N, Fernie AR, Erban A, Kopka J, Clark J, Langer A, Geigenberger P. van Dongen JT, et al. Among authors: kopka j. Ann Bot. 2009 Jan;103(2):269-80. doi: 10.1093/aob/mcn126. Epub 2008 Jul 25. Ann Bot. 2009. PMID: 18660497 Free PMC article.

10

A rapid approach for phenotype-screening and database independent detection of cSNP/protein polymorphism using mass accuracy precursor alignment.

Hoehenwarter W, van Dongen JT, Wienkoop S, Steinfath M, Hummel J, Erban A, Sulpice R, Regierer B, Kopka J, Geigenberger P, Weckwerth W. Hoehenwarter W, et al. Among authors: kopka j. Proteomics. 2008 Oct;8(20):4214-25. doi: 10.1002/pmic.200701047. Proteomics. 2008. PMID: 18924179

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