Kono T - Search Results

1

Genetic elucidation of interconnected antibiotic pathways mediating maize innate immunity.

Ding Y, Weckwerth PR, Poretsky E, Murphy KM, Sims J, Saldivar E, Christensen SA, Char SN, Yang B, Tong AD, Shen Z, Kremling KA, Buckler ES, Kono T, Nelson DR, Bohlmann J, Bakker MG, Vaughan MM, Khalil AS, Betsiashvili M, Dressano K, Köllner TG, Briggs SP, Zerbe P, Schmelz EA, Huffaker A. Ding Y, et al. Among authors: kono t. Nat Plants. 2020 Nov;6(11):1375-1388. doi: 10.1038/s41477-020-00787-9. Epub 2020 Oct 26. Nat Plants. 2020. PMID: 33106639

2

Tandem Duplicate Genes in Maize Are Abundant and Date to Two Distinct Periods of Time.

Kono TJY, Brohammer AB, McGaugh SE, Hirsch CN. Kono TJY, et al. G3 (Bethesda). 2018 Aug 30;8(9):3049-3058. doi: 10.1534/g3.118.200580. G3 (Bethesda). 2018. PMID: 30030405 Free PMC article.

3

The limited role of differential fractionation in genome content variation and function in maize (Zea mays L.) inbred lines.

Brohammer AB, Kono TJY, Springer NM, McGaugh SE, Hirsch CN. Brohammer AB, et al. Plant J. 2018 Jan;93(1):131-141. doi: 10.1111/tpj.13765. Epub 2017 Dec 2. Plant J. 2018. PMID: 29124819 Free article.

4

Genome-wide association analysis of stalk biomass and anatomical traits in maize.

Mazaheri M, Heckwolf M, Vaillancourt B, Gage JL, Burdo B, Heckwolf S, Barry K, Lipzen A, Ribeiro CB, Kono TJY, Kaeppler HF, Spalding EP, Hirsch CN, Robin Buell C, de Leon N, Kaeppler SM. Mazaheri M, et al. BMC Plant Biol. 2019 Jan 31;19(1):45. doi: 10.1186/s12870-019-1653-x. BMC Plant Biol. 2019. PMID: 30704393 Free PMC article.

5

Nonrandom RNAseq gene expression associated with RNAlater and flash freezing storage methods.

Passow CN, Kono TJY, Stahl BA, Jaggard JB, Keene AC, McGaugh SE. Passow CN, et al. Mol Ecol Resour. 2019 Mar;19(2):456-464. doi: 10.1111/1755-0998.12965. Epub 2018 Dec 21. Mol Ecol Resour. 2019. PMID: 30447171 Free PMC article.

6

angsd-wrapper: utilities for analysing next-generation sequencing data.

Durvasula A, Hoffman PJ, Kent TV, Liu C, Kono TJ, Morrell PL, Ross-Ibarra J. Durvasula A, et al. Mol Ecol Resour. 2016 Nov;16(6):1449-1454. doi: 10.1111/1755-0998.12578. Epub 2016 Aug 29. Mol Ecol Resour. 2016. PMID: 27480660

7

Comparative Genomics Approaches Accurately Predict Deleterious Variants in Plants.

Kono TJY, Lei L, Shih CH, Hoffman PJ, Morrell PL, Fay JC. Kono TJY, et al. G3 (Bethesda). 2018 Oct 3;8(10):3321-3329. doi: 10.1534/g3.118.200563. G3 (Bethesda). 2018. PMID: 30139765 Free PMC article.

8

Whole-genome assembly and annotation of northern wild rice, Zizania palustris L., supports a whole-genome duplication in the Zizania genus.

Haas M, Kono T, Macchietto M, Millas R, McGilp L, Shao M, Duquette J, Qiu Y, Hirsch CN, Kimball J. Haas M, et al. Among authors: kono t. Plant J. 2021 Sep;107(6):1802-1818. doi: 10.1111/tpj.15419. Epub 2021 Aug 14. Plant J. 2021. PMID: 34310794 Free article.

9

Interactive transcriptome analyses of Northern Wild Rice (Zizania palustris L.) and Bipolaris oryzae show convoluted communications during the early stages of fungal brown spot development.

Castell-Miller CV, Kono TJY, Ranjan A, Schlatter DC, Samac DA, Kimball JA. Castell-Miller CV, et al. Among authors: kono tjy. Front Plant Sci. 2024 Apr 26;15:1350281. doi: 10.3389/fpls.2024.1350281. eCollection 2024. Front Plant Sci. 2024. PMID: 38736448 Free PMC article.

10

Genomic variation and DNA repair associated with soybean transgenesis: a comparison to cultivars and mutagenized plants.

Anderson JE, Michno JM, Kono TJ, Stec AO, Campbell BW, Curtin SJ, Stupar RM. Anderson JE, et al. BMC Biotechnol. 2016 May 12;16(1):41. doi: 10.1186/s12896-016-0271-z. BMC Biotechnol. 2016. PMID: 27176220 Free PMC article.

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