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The CCP4 suite: integrative software for macromolecular crystallography.
Agirre J, Atanasova M, Bagdonas H, Ballard CB, Baslé A, Beilsten-Edmands J, Borges RJ, Brown DG, Burgos-Mármol JJ, Berrisford JM, Bond PS, Caballero I, Catapano L, Chojnowski G, Cook AG, Cowtan KD, Croll TI, Debreczeni JÉ, Devenish NE, Dodson EJ, Drevon TR, Emsley P, Evans G, Evans PR, Fando M, Foadi J, Fuentes-Montero L, Garman EF, Gerstel M, Gildea RJ, Hatti K, Hekkelman ML, Heuser P, Hoh SW, Hough MA, Jenkins HT, Jiménez E, Joosten RP, Keegan RM, Keep N, Krissinel EB, Kolenko P, Kovalevskiy O, Lamzin VS, Lawson DM, Lebedev AA, Leslie AGW, Lohkamp B, Long F, Malý M, McCoy AJ, McNicholas SJ, Medina A, Millán C, Murray JW, Murshudov GN, Nicholls RA, Noble MEM, Oeffner R, Pannu NS, Parkhurst JM, Pearce N, Pereira J, Perrakis A, Powell HR, Read RJ, Rigden DJ, Rochira W, Sammito M, Sánchez Rodríguez F, Sheldrick GM, Shelley KL, Simkovic F, Simpkin AJ, Skubak P, Sobolev E, Steiner RA, Stevenson K, Tews I, Thomas JMH, Thorn A, Valls JT, Uski V, Usón I, Vagin A, Velankar S, Vollmar M, Walden H, Waterman D, Wilson KS, Winn MD, Winter G, Wojdyr M, Yamashita K. Agirre J, et al. Among authors: kolenko p. Acta Crystallogr D Struct Biol. 2023 Jun 1;79(Pt 6):449-461. doi: 10.1107/S2059798323003595. Epub 2023 May 30. Acta Crystallogr D Struct Biol. 2023. PMID: 37259835 Free PMC article.
Paired refinement under the control of PAIREF.
Malý M, Diederichs K, Dohnálek J, Kolenko P. Malý M, et al. Among authors: kolenko p. IUCrJ. 2020 Jun 10;7(Pt 4):681-692. doi: 10.1107/S2052252520005916. eCollection 2020 Jul 1. IUCrJ. 2020. PMID: 32695415 Free PMC article.
PAIREF: paired refinement also for Phenix users.
Malý M, Diederichs K, Dohnálek J, Kolenko P. Malý M, et al. Among authors: kolenko p. Acta Crystallogr F Struct Biol Commun. 2021 Jul 1;77(Pt 7):226-229. doi: 10.1107/S2053230X21006129. Epub 2021 Jun 29. Acta Crystallogr F Struct Biol Commun. 2021. PMID: 34196613 Free PMC article.
Atomic resolution studies of S1 nuclease complexes reveal details of RNA interaction with the enzyme despite multiple lattice-translocation defects.
Adámková K, Koval' T, Østergaard LH, Dušková J, Malý M, Švecová L, Skálová T, Kolenko P, Dohnálek J. Adámková K, et al. Among authors: kolenko p. Acta Crystallogr D Struct Biol. 2022 Oct 1;78(Pt 10):1194-1209. doi: 10.1107/S2059798322008397. Epub 2022 Sep 27. Acta Crystallogr D Struct Biol. 2022. PMID: 36189740
Tetracycline-modifying enzyme SmTetX from Stenotrophomonas maltophilia.
Malý M, Kolenko P, Stránský J, Švecová L, Dušková J, Koval' T, Skálová T, Trundová M, Adámková K, Černý J, Božíková P, Dohnálek J. Malý M, et al. Among authors: kolenko p. Acta Crystallogr F Struct Biol Commun. 2023 Jul 1;79(Pt 7):180-192. doi: 10.1107/S2053230X23005381. Epub 2023 Jul 5. Acta Crystallogr F Struct Biol Commun. 2023. PMID: 37405486 Free PMC article.
Conformation-based refinement of 18-mer DNA structures.
Svoboda J, Berdár D, Kolenko P, Černý J, Nováková Z, Pavlíček J, Schneider B. Svoboda J, et al. Among authors: kolenko p. Acta Crystallogr D Struct Biol. 2023 Jul 1;79(Pt 7):655-665. doi: 10.1107/S2059798323004679. Epub 2023 Jun 20. Acta Crystallogr D Struct Biol. 2023. PMID: 37338420 Free PMC article.
Crystallization and preliminary X-ray diffraction analysis of the small laccase from Streptomyces coelicolor.
Skálová T, Dohnálek J, Ostergaard LH, Ostergaard PR, Kolenko P, Dusková J, Hasek J. Skálová T, et al. Among authors: kolenko p. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Dec 1;63(Pt 12):1077-9. doi: 10.1107/S1744309107060721. Epub 2007 Nov 30. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007. PMID: 18084099 Free PMC article.
41 results