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HLA Ligand Atlas: a benign reference of HLA-presented peptides to improve T-cell-based cancer immunotherapy.
Marcu A, Bichmann L, Kuchenbecker L, Kowalewski DJ, Freudenmann LK, Backert L, Mühlenbruch L, Szolek A, Lübke M, Wagner P, Engler T, Matovina S, Wang J, Hauri-Hohl M, Martin R, Kapolou K, Walz JS, Velz J, Moch H, Regli L, Silginer M, Weller M, Löffler MW, Erhard F, Schlosser A, Kohlbacher O, Stevanović S, Rammensee HG, Neidert MC. Marcu A, et al. Among authors: kohlbacher o. J Immunother Cancer. 2021 Apr;9(4):e002071. doi: 10.1136/jitc-2020-002071. J Immunother Cancer. 2021. PMID: 33858848 Free PMC article.
SNEP: SNP-derived epitope prediction program for minor H antigens.
Schuler MM, Dönnes P, Nastke MD, Kohlbacher O, Rammensee HG, Stevanovic S. Schuler MM, et al. Among authors: kohlbacher o. Immunogenetics. 2005 Dec;57(11):816-20. doi: 10.1007/s00251-005-0054-5. Epub 2005 Dec 10. Immunogenetics. 2005. PMID: 16341860
EpiToolKit--a web server for computational immunomics.
Feldhahn M, Thiel P, Schuler MM, Hillen N, Stevanovic S, Rammensee HG, Kohlbacher O. Feldhahn M, et al. Among authors: kohlbacher o. Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W519-22. doi: 10.1093/nar/gkn229. Epub 2008 Apr 24. Nucleic Acids Res. 2008. PMID: 18440979 Free PMC article.
OptiType: precision HLA typing from next-generation sequencing data.
Szolek A, Schubert B, Mohr C, Sturm M, Feldhahn M, Kohlbacher O. Szolek A, et al. Among authors: kohlbacher o. Bioinformatics. 2014 Dec 1;30(23):3310-6. doi: 10.1093/bioinformatics/btu548. Epub 2014 Aug 20. Bioinformatics. 2014. PMID: 25143287 Free PMC article.
FRED 2: an immunoinformatics framework for Python.
Schubert B, Walzer M, Brachvogel HP, Szolek A, Mohr C, Kohlbacher O. Schubert B, et al. Among authors: kohlbacher o. Bioinformatics. 2016 Jul 1;32(13):2044-6. doi: 10.1093/bioinformatics/btw113. Epub 2016 Feb 26. Bioinformatics. 2016. PMID: 27153717 Free PMC article.
Personalized peptide vaccine-induced immune response associated with long-term survival of a metastatic cholangiocarcinoma patient.
Löffler MW, Chandran PA, Laske K, Schroeder C, Bonzheim I, Walzer M, Hilke FJ, Trautwein N, Kowalewski DJ, Schuster H, Günder M, Carcamo Yañez VA, Mohr C, Sturm M, Nguyen HP, Riess O, Bauer P, Nahnsen S, Nadalin S, Zieker D, Glatzle J, Thiel K, Schneiderhan-Marra N, Clasen S, Bösmüller H, Fend F, Kohlbacher O, Gouttefangeas C, Stevanović S, Königsrainer A, Rammensee HG. Löffler MW, et al. Among authors: kohlbacher o. J Hepatol. 2016 Oct;65(4):849-855. doi: 10.1016/j.jhep.2016.06.027. Epub 2016 Jul 7. J Hepatol. 2016. PMID: 27397612 Free PMC article.
253 results