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Insights into mammalian TE diversity through the curation of 248 genome assemblies.
Osmanski AB, Paulat NS, Korstian J, Grimshaw JR, Halsey M, Sullivan KAM, Moreno-Santillán DD, Crookshanks C, Roberts J, Garcia C, Johnson MG, Densmore LD, Stevens RD; Zoonomia Consortium†; Rosen J, Storer JM, Hubley R, Smit AFA, Dávalos LM, Karlsson EK, Lindblad-Toh K, Ray DA. Osmanski AB, et al. Science. 2023 Apr 28;380(6643):eabn1430. doi: 10.1126/science.abn1430. Epub 2023 Apr 28. Science. 2023. PMID: 37104570 Free article.
Chromosomal-level genome assembly of the scimitar-horned oryx: Insights into diversity and demography of a species extinct in the wild.
Humble E, Dobrynin P, Senn H, Chuven J, Scott AF, Mohr DW, Dudchenko O, Omer AD, Colaric Z, Lieberman Aiden E, Al Dhaheri SS, Wildt D, Oliaji S, Tamazian G, Pukazhenthi B, Ogden R, Koepfli KP. Humble E, et al. Among authors: koepfli kp. Mol Ecol Resour. 2020 Nov;20(6):1668-1681. doi: 10.1111/1755-0998.13181. Epub 2020 Jun 7. Mol Ecol Resour. 2020. PMID: 32365406 Free PMC article.
Whole-genome analysis of giraffe supports four distinct species.
Coimbra RTF, Winter S, Kumar V, Koepfli KP, Gooley RM, Dobrynin P, Fennessy J, Janke A. Coimbra RTF, et al. Among authors: koepfli kp. Curr Biol. 2021 Jul 12;31(13):2929-2938.e5. doi: 10.1016/j.cub.2021.04.033. Epub 2021 May 5. Curr Biol. 2021. PMID: 33957077 Free article.
Genomic analyses reveal range-wide devastation of sea otter populations.
Beichman AC, Kalhori P, Kyriazis CC, DeVries AA, Nigenda-Morales S, Heckel G, Schramm Y, Moreno-Estrada A, Kennett DJ, Hylkema M, Bodkin J, Koepfli KP, Lohmueller KE, Wayne RK. Beichman AC, et al. Among authors: koepfli kp. Mol Ecol. 2023 Jan;32(2):281-298. doi: 10.1111/mec.16334. Epub 2022 Jan 17. Mol Ecol. 2023. PMID: 34967471 Free PMC article.
Genomic legacy of the African cheetah, Acinonyx jubatus.
Dobrynin P, Liu S, Tamazian G, Xiong Z, Yurchenko AA, Krasheninnikova K, Kliver S, Schmidt-Küntzel A, Koepfli KP, Johnson W, Kuderna LF, García-Pérez R, Manuel Md, Godinez R, Komissarov A, Makunin A, Brukhin V, Qiu W, Zhou L, Li F, Yi J, Driscoll C, Antunes A, Oleksyk TK, Eizirik E, Perelman P, Roelke M, Wildt D, Diekhans M, Marques-Bonet T, Marker L, Bhak J, Wang J, Zhang G, O'Brien SJ. Dobrynin P, et al. Among authors: koepfli kp. Genome Biol. 2015 Dec 10;16:277. doi: 10.1186/s13059-015-0837-4. Genome Biol. 2015. PMID: 26653294 Free PMC article.
Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours.
Kukekova AV, Johnson JL, Xiang X, Feng S, Liu S, Rando HM, Kharlamova AV, Herbeck Y, Serdyukova NA, Xiong Z, Beklemischeva V, Koepfli KP, Gulevich RG, Vladimirova AV, Hekman JP, Perelman PL, Graphodatsky AS, O'Brien SJ, Wang X, Clark AG, Acland GM, Trut LN, Zhang G. Kukekova AV, et al. Among authors: koepfli kp. Nat Ecol Evol. 2018 Sep;2(9):1479-1491. doi: 10.1038/s41559-018-0611-6. Epub 2018 Aug 6. Nat Ecol Evol. 2018. PMID: 30082739 Free PMC article.
102 results