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QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy.
Nelson G, Boehm U, Bagley S, Bajcsy P, Bischof J, Brown CM, Dauphin A, Dobbie IM, Eriksson JE, Faklaris O, Fernandez-Rodriguez J, Ferrand A, Gelman L, Gheisari A, Hartmann H, Kukat C, Laude A, Mitkovski M, Munck S, North AJ, Rasse TM, Resch-Genger U, Schuetz LC, Seitz A, Strambio-De-Castillia C, Swedlow JR, Alexopoulos I, Aumayr K, Avilov S, Bakker GJ, Bammann RR, Bassi A, Beckert H, Beer S, Belyaev Y, Bierwagen J, Birngruber KA, Bosch M, Breitlow J, Cameron LA, Chalfoun J, Chambers JJ, Chen CL, Conde-Sousa E, Corbett AD, Cordelieres FP, Nery ED, Dietzel R, Eismann F, Fazeli E, Felscher A, Fried H, Gaudreault N, Goh WI, Guilbert T, Hadleigh R, Hemmerich P, Holst GA, Itano MS, Jaffe CB, Jambor HK, Jarvis SC, Keppler A, Kirchenbuechler D, Kirchner M, Kobayashi N, Krens G, Kunis S, Lacoste J, Marcello M, Martins GG, Metcalf DJ, Mitchell CA, Moore J, Mueller T, Nelson MS, Ogg S, Onami S, Palmer AL, Paul-Gilloteaux P, Pimentel JA, Plantard L, Podder S, Rexhepaj E, Royon A, Saari MA, Schapman D, Schoonderwoert V, Schroth-Diez B, Schwartz S, Shaw M, Spitaler M, Stoeckl MT, Sudar D, Teillon J, Terjung S, Thuenauer R, Wilms CD, Wright GD, Nitschke R. Nelson G, et al. Among authors: kobayashi n. J Microsc. 2021 Oct;284(1):56-73. doi: 10.1111/jmi.13041. Epub 2021 Aug 11. J Microsc. 2021. PMID: 34214188 Free PMC article.
Development of RIKEN Plant Metabolome MetaDatabase.
Fukushima A, Takahashi M, Nagasaki H, Aono Y, Kobayashi M, Kusano M, Saito K, Kobayashi N, Arita M. Fukushima A, et al. Among authors: kobayashi m, kobayashi n. Plant Cell Physiol. 2022 Mar 11;63(3):433-440. doi: 10.1093/pcp/pcab173. Plant Cell Physiol. 2022. PMID: 34918130 Free PMC article.
Statistical search on the Semantic Web.
Kobayashi N, Toyoda T. Kobayashi N, et al. Bioinformatics. 2008 Apr 1;24(7):1002-10. doi: 10.1093/bioinformatics/btn054. Epub 2008 Feb 8. Bioinformatics. 2008. PMID: 18263641
Arabidopsis tiling array analysis to identify the stress-responsive genes.
Matsui A, Ishida J, Morosawa T, Okamoto M, Kim JM, Kurihara Y, Kawashima M, Tanaka M, To TK, Nakaminami K, Kaminuma E, Endo TA, Mochizuki Y, Kawaguchi S, Kobayashi N, Shinozaki K, Toyoda T, Seki M. Matsui A, et al. Among authors: kobayashi n. Methods Mol Biol. 2010;639:141-55. doi: 10.1007/978-1-60761-702-0_8. Methods Mol Biol. 2010. PMID: 20387044
ViBrism DB: an interactive search and viewer platform for 2D/3D anatomical images of gene expression and co-expression networks.
Morita M, Shimokawa K, Nishimura M, Nakamura S, Tsujimura Y, Takemoto S, Tawara T, Yokota H, Wemler S, Miyamoto D, Ikeno H, Sato A, Furuichi T, Kobayashi N, Okumura Y, Yamaguchi Y, Okamura-Oho Y. Morita M, et al. Among authors: kobayashi n. Nucleic Acids Res. 2019 Jan 8;47(D1):D859-D866. doi: 10.1093/nar/gky951. Nucleic Acids Res. 2019. PMID: 30371824 Free PMC article.
ARTADE2DB: improved statistical inferences for Arabidopsis gene functions and structure predictions by dynamic structure-based dynamic expression (DSDE) analyses.
Iida K, Kawaguchi S, Kobayashi N, Yoshida Y, Ishii M, Harada E, Hanada K, Matsui A, Okamoto M, Ishida J, Tanaka M, Morosawa T, Seki M, Toyoda T. Iida K, et al. Among authors: kobayashi n. Plant Cell Physiol. 2011 Feb;52(2):254-64. doi: 10.1093/pcp/pcq202. Epub 2011 Jan 12. Plant Cell Physiol. 2011. PMID: 21227933 Free PMC article.
Triple-drug combination therapy versus six-month proton pump inhibitor monotherapy in non-Helicobacter pylori Helicobacter eradication, and hyperacid environment preference of Helicobacter suis: a clinical study.
Tsukadaira T, Hayashi S, Ota H, Kobayashi N, Agawa H, Kodaira H, Sekiguchi Y, Matsumoto T, Horiuchi K, Negishi T, Tada T. Tsukadaira T, et al. Among authors: kobayashi n. BMC Gastroenterol. 2024 May 8;24(1):157. doi: 10.1186/s12876-024-03252-5. BMC Gastroenterol. 2024. PMID: 38720287 Free PMC article.
5,038 results