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The treatment-naive microbiome in new-onset Crohn's disease.
Gevers D, Kugathasan S, Denson LA, Vázquez-Baeza Y, Van Treuren W, Ren B, Schwager E, Knights D, Song SJ, Yassour M, Morgan XC, Kostic AD, Luo C, González A, McDonald D, Haberman Y, Walters T, Baker S, Rosh J, Stephens M, Heyman M, Markowitz J, Baldassano R, Griffiths A, Sylvester F, Mack D, Kim S, Crandall W, Hyams J, Huttenhower C, Knight R, Xavier RJ. Gevers D, et al. Among authors: knight r. Cell Host Microbe. 2014 Mar 12;15(3):382-392. doi: 10.1016/j.chom.2014.02.005. Cell Host Microbe. 2014. PMID: 24629344 Free PMC article.
Forensic identification using skin bacterial communities.
Fierer N, Lauber CL, Zhou N, McDonald D, Costello EK, Knight R. Fierer N, et al. Among authors: knight r. Proc Natl Acad Sci U S A. 2010 Apr 6;107(14):6477-81. doi: 10.1073/pnas.1000162107. Epub 2010 Mar 15. Proc Natl Acad Sci U S A. 2010. PMID: 20231444 Free PMC article.
Direct sequencing of the human microbiome readily reveals community differences.
Kuczynski J, Costello EK, Nemergut DR, Zaneveld J, Lauber CL, Knights D, Koren O, Fierer N, Kelley ST, Ley RE, Gordon JI, Knight R. Kuczynski J, et al. Among authors: knight r. Genome Biol. 2010;11(5):210. doi: 10.1186/gb-2010-11-5-210. Epub 2010 May 5. Genome Biol. 2010. PMID: 20441597 Free PMC article. Review.
Supervised classification of microbiota mitigates mislabeling errors.
Knights D, Kuczynski J, Koren O, Ley RE, Field D, Knight R, DeSantis TZ, Kelley ST. Knights D, et al. Among authors: knight r. ISME J. 2011 Apr;5(4):570-3. doi: 10.1038/ismej.2010.148. Epub 2010 Oct 7. ISME J. 2011. PMID: 20927137 Free PMC article. No abstract available.
Supervised classification of human microbiota.
Knights D, Costello EK, Knight R. Knights D, et al. Among authors: knight r. FEMS Microbiol Rev. 2011 Mar;35(2):343-59. doi: 10.1111/j.1574-6976.2010.00251.x. Epub 2010 Oct 7. FEMS Microbiol Rev. 2011. PMID: 21039646 Free article. Review.
The mind-body-microbial continuum.
Gonzalez A, Stombaugh J, Lozupone C, Turnbaugh PJ, Gordon JI, Knight R. Gonzalez A, et al. Among authors: knight r. Dialogues Clin Neurosci. 2011;13(1):55-62. doi: 10.31887/DCNS.2011.13.1/agonzalez. Dialogues Clin Neurosci. 2011. PMID: 21485746 Free PMC article.
Boulder ALignment Editor (ALE): a web-based RNA alignment tool.
Stombaugh J, Widmann J, McDonald D, Knight R. Stombaugh J, et al. Among authors: knight r. Bioinformatics. 2011 Jun 15;27(12):1706-7. doi: 10.1093/bioinformatics/btr258. Epub 2011 May 5. Bioinformatics. 2011. PMID: 21546392 Free PMC article.
3,328 results