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In Silico Vaccine Strain Prediction for Human Influenza Viruses.
Trends Microbiol. 2018 Feb;26(2):119-131. doi: 10.1016/j.tim.2017.09.001. Epub 2017 Oct 9.
Trends Microbiol. 2018.
PMID: 29032900
Review.
Sweep Dynamics (SD) plots: Computational identification of selective sweeps to monitor the adaptation of influenza A viruses.
Klingen TR, Reimering S, Loers J, Mooren K, Klawonn F, Krey T, Gabriel G, McHardy AC.
Klingen TR, et al.
Sci Rep. 2018 Jan 10;8(1):373. doi: 10.1038/s41598-017-18791-z.
Sci Rep. 2018.
PMID: 29321538
Free PMC article.
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Structures and functions linked to genome-wide adaptation of human influenza A viruses.
Klingen TR, Loers J, Stanelle-Bertram S, Gabriel G, McHardy AC.
Klingen TR, et al.
Sci Rep. 2019 Apr 18;9(1):6267. doi: 10.1038/s41598-019-42614-y.
Sci Rep. 2019.
PMID: 31000776
Free PMC article.
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Computational prediction of vaccine strains for human influenza A (H3N2) viruses.
Steinbrück L, Klingen TR, McHardy AC.
Steinbrück L, et al. Among authors: klingen tr.
J Virol. 2014 Oct;88(20):12123-32. doi: 10.1128/JVI.01861-14. Epub 2014 Aug 13.
J Virol. 2014.
PMID: 25122778
Free PMC article.
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Evolution of 2009 H1N1 influenza viruses during the pandemic correlates with increased viral pathogenicity and transmissibility in the ferret model.
Otte A, Marriott AC, Dreier C, Dove B, Mooren K, Klingen TR, Sauter M, Thompson KA, Bennett A, Klingel K, van Riel D, McHardy AC, Carroll MW, Gabriel G.
Otte A, et al. Among authors: klingen tr.
Sci Rep. 2016 Jun 24;6:28583. doi: 10.1038/srep28583.
Sci Rep. 2016.
PMID: 27339001
Free PMC article.
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Determination of antigenicity-altering patches on the major surface protein of human influenza A/H3N2 viruses.
Kratsch C, Klingen TR, Mümken L, Steinbrück L, McHardy AC.
Kratsch C, et al. Among authors: klingen tr.
Virus Evol. 2016 Feb 14;2(1):vev025. doi: 10.1093/ve/vev025. eCollection 2016 Jan.
Virus Evol. 2016.
PMID: 27774294
Free PMC article.
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Transformation of microbiology data into a standardised data representation using OpenEHR.
Wulff A, Baier C, Ballout S, Tute E, Sommer KK, Kaase M, Sargeant A, Drenkhahn C; Infection Control Study Group; Schlüter D, Marschollek M, Scheithauer S.
Wulff A, et al.
Sci Rep. 2021 May 18;11(1):10556. doi: 10.1038/s41598-021-89796-y.
Sci Rep. 2021.
PMID: 34006956
Free PMC article.
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