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Chromatin jets define the properties of cohesin-driven in vivo loop extrusion.
Mol Cell. 2022 Oct 20;82(20):3769-3780.e5. doi: 10.1016/j.molcel.2022.09.003. Epub 2022 Sep 30.
Mol Cell. 2022.
PMID: 36182691
Free article.
Conserved non-coding elements: developmental gene regulation meets genome organization.
Polychronopoulos D, King JWD, Nash AJ, Tan G, Lenhard B.
Polychronopoulos D, et al. Among authors: king jwd.
Nucleic Acids Res. 2017 Dec 15;45(22):12611-12624. doi: 10.1093/nar/gkx1074.
Nucleic Acids Res. 2017.
PMID: 29121339
Free PMC article.
Review.
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A deep learning method for replicate-based analysis of chromosome conformation contacts using Siamese neural networks.
Al-Jibury E, King JWD, Guo Y, Lenhard B, Fisher AG, Merkenschlager M, Rueckert D.
Al-Jibury E, et al. Among authors: king jwd.
Nat Commun. 2023 Aug 17;14(1):5007. doi: 10.1038/s41467-023-40547-9.
Nat Commun. 2023.
PMID: 37591842
Free PMC article.
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Integrative genomic analyses in adipocytes implicate DNA methylation in human obesity and diabetes.
McAllan L, Baranasic D, Villicaña S, Brown S, Zhang W, Lehne B, Adamo M, Jenkinson A, Elkalaawy M, Mohammadi B, Hashemi M, Fernandes N, Lambie N, Williams R, Christiansen C, Yang Y, Zudina L, Lagou V, Tan S, Castillo-Fernandez J, King JWD, Soong R, Elliott P, Scott J, Prokopenko I, Cebola I, Loh M, Lenhard B, Batterham RL, Bell JT, Chambers JC, Kooner JS, Scott WR.
McAllan L, et al. Among authors: king jwd.
Nat Commun. 2023 May 15;14(1):2784. doi: 10.1038/s41467-023-38439-z.
Nat Commun. 2023.
PMID: 37188674
Free PMC article.
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