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Inconsistency and features of single nucleotide variants detected in whole exome sequencing versus transcriptome sequencing: A case study in lung cancer.
O'Brien TD, Jia P, Xia J, Saxena U, Jin H, Vuong H, Kim P, Wang Q, Aryee MJ, Mino-Kenudson M, Engelman JA, Le LP, Iafrate AJ, Heist RS, Pao W, Zhao Z. O'Brien TD, et al. Among authors: kim p. Methods. 2015 Jul 15;83:118-27. doi: 10.1016/j.ymeth.2015.04.016. Epub 2015 Apr 23. Methods. 2015. PMID: 25913717 Free PMC article.
ccmGDB: a database for cancer cell metabolism genes.
Kim P, Cheng F, Zhao J, Zhao Z. Kim P, et al. Nucleic Acids Res. 2016 Jan 4;44(D1):D959-68. doi: 10.1093/nar/gkv1128. Epub 2015 Oct 30. Nucleic Acids Res. 2016. PMID: 26519468 Free PMC article.
mutLBSgeneDB: mutated ligand binding site gene DataBase.
Kim P, Zhao J, Lu P, Zhao Z. Kim P, et al. Nucleic Acids Res. 2017 Jan 4;45(D1):D256-D263. doi: 10.1093/nar/gkw905. Epub 2016 Oct 7. Nucleic Acids Res. 2017. PMID: 27907895 Free PMC article.
TissGDB: tissue-specific gene database in cancer.
Kim P, Park A, Han G, Sun H, Jia P, Zhao Z. Kim P, et al. Nucleic Acids Res. 2018 Jan 4;46(D1):D1031-D1038. doi: 10.1093/nar/gkx850. Nucleic Acids Res. 2018. PMID: 29036590 Free PMC article.
Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas.
Knijnenburg TA, Wang L, Zimmermann MT, Chambwe N, Gao GF, Cherniack AD, Fan H, Shen H, Way GP, Greene CS, Liu Y, Akbani R, Feng B, Donehower LA, Miller C, Shen Y, Karimi M, Chen H, Kim P, Jia P, Shinbrot E, Zhang S, Liu J, Hu H, Bailey MH, Yau C, Wolf D, Zhao Z, Weinstein JN, Li L, Ding L, Mills GB, Laird PW, Wheeler DA, Shmulevich I; Cancer Genome Atlas Research Network; Monnat RJ Jr, Xiao Y, Wang C. Knijnenburg TA, et al. Among authors: kim p. Cell Rep. 2018 Apr 3;23(1):239-254.e6. doi: 10.1016/j.celrep.2018.03.076. Cell Rep. 2018. PMID: 29617664 Free PMC article.
Genomic analysis reveals secondary glioblastoma after radiotherapy in a subset of recurrent medulloblastomas.
Phi JH, Park AK, Lee S, Choi SA, Baek IP, Kim P, Kim EH, Park HC, Kim BC, Bhak J, Park SH, Lee JY, Wang KC, Kim DS, Shim KW, Kim SH, Kim CY, Kim SK. Phi JH, et al. Among authors: kim ds, kim bc, kim eh, kim sh, kim cy, kim sk, kim p. Acta Neuropathol. 2018 Jun;135(6):939-953. doi: 10.1007/s00401-018-1845-8. Epub 2018 Apr 11. Acta Neuropathol. 2018. PMID: 29644394
4,823 results