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Towards diagnostic metagenomics of Campylobacter in fecal samples.
Andersen SC, Kiil K, Harder CB, Josefsen MH, Persson S, Nielsen EM, Hoorfar J. Andersen SC, et al. Among authors: kiil k. BMC Microbiol. 2017 Jun 8;17(1):133. doi: 10.1186/s12866-017-1041-3. BMC Microbiol. 2017. PMID: 28595575 Free PMC article.
LiSEQ - whole-genome sequencing of a cross-sectional survey of Listeria monocytogenes in ready-to-eat foods and human clinical cases in Europe.
Painset A, Björkman JT, Kiil K, Guillier L, Mariet JF, Félix B, Amar C, Rotariu O, Roussel S, Perez-Reche F, Brisse S, Moura A, Lecuit M, Forbes K, Strachan N, Grant K, Møller-Nielsen E, Dallman TJ. Painset A, et al. Among authors: kiil k. Microb Genom. 2019 Feb;5(2):e000257. doi: 10.1099/mgen.0.000257. Epub 2019 Feb 18. Microb Genom. 2019. PMID: 30775964 Free PMC article.
Whole-genome Sequencing Used to Investigate a Nationwide Outbreak of Listeriosis Caused by Ready-to-eat Delicatessen Meat, Denmark, 2014.
Kvistholm Jensen A, Nielsen EM, Björkman JT, Jensen T, Müller L, Persson S, Bjerager G, Perge A, Krause TG, Kiil K, Sørensen G, Andersen JK, Mølbak K, Ethelberg S. Kvistholm Jensen A, et al. Among authors: kiil k. Clin Infect Dis. 2016 Jul 1;63(1):64-70. doi: 10.1093/cid/ciw192. Epub 2016 Mar 29. Clin Infect Dis. 2016. PMID: 27025820
Whole-genome sequencing of bloodstream Staphylococcus aureus isolates does not distinguish bacteraemia from endocarditis.
Lilje B, Rasmussen RV, Dahl A, Stegger M, Skov RL, Fowler VG, Ng KL, Kiil K, Larsen AR, Petersen A, Johansen HK, Schønheyder HC, Arpi M, Rosenvinge FS, Korup E, Høst U, Hassager C, Gill SUA, Hansen TF, Johannesen TB, Smit J, Søgaard P, Skytt Andersen P, Eske-Bruun N. Lilje B, et al. Among authors: kiil k. Microb Genom. 2017 Nov;3(11):e000138. doi: 10.1099/mgen.0.000138. Microb Genom. 2017. PMID: 29208121 Free PMC article.
PulseNet International: Vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance.
Nadon C, Van Walle I, Gerner-Smidt P, Campos J, Chinen I, Concepcion-Acevedo J, Gilpin B, Smith AM, Man Kam K, Perez E, Trees E, Kubota K, Takkinen J, Nielsen EM, Carleton H; FWD-NEXT Expert Panel. Nadon C, et al. Euro Surveill. 2017 Jun 8;22(23):30544. doi: 10.2807/1560-7917.ES.2017.22.23.30544. Euro Surveill. 2017. PMID: 28662764 Free PMC article. Review.
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