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Initial sequencing and comparative analysis of the mouse genome.
Nature. 2002 Dec 5;420(6915):520-62. doi: 10.1038/nature01262.
Nature. 2002.
PMID: 12466850
Leveraging the mouse genome for gene prediction in human: from whole-genome shotgun reads to a global synteny map.
Flicek P, Keibler E, Hu P, Korf I, Brent MR.
Flicek P, et al. Among authors: keibler e.
Genome Res. 2003 Jan;13(1):46-54. doi: 10.1101/gr.830003.
Genome Res. 2003.
PMID: 12529305
Free PMC article.
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The DNA sequence of human chromosome 7.
Hillier LW, Fulton RS, Fulton LA, Graves TA, Pepin KH, Wagner-McPherson C, Layman D, Maas J, Jaeger S, Walker R, Wylie K, Sekhon M, Becker MC, O'Laughlin MD, Schaller ME, Fewell GA, Delehaunty KD, Miner TL, Nash WE, Cordes M, Du H, Sun H, Edwards J, Bradshaw-Cordum H, Ali J, Andrews S, Isak A, Vanbrunt A, Nguyen C, Du F, Lamar B, Courtney L, Kalicki J, Ozersky P, Bielicki L, Scott K, Holmes A, Harkins R, Harris A, Strong CM, Hou S, Tomlinson C, Dauphin-Kohlberg S, Kozlowicz-Reilly A, Leonard S, Rohlfing T, Rock SM, Tin-Wollam AM, Abbott A, Minx P, Maupin R, Strowmatt C, Latreille P, Miller N, Johnson D, Murray J, Woessner JP, Wendl MC, Yang SP, Schultz BR, Wallis JW, Spieth J, Bieri TA, Nelson JO, Berkowicz N, Wohldmann PE, Cook LL, Hickenbotham MT, Eldred J, Williams D, Bedell JA, Mardis ER, Clifton SW, Chissoe SL, Marra MA, Raymond C, Haugen E, Gillett W, Zhou Y, James R, Phelps K, Iadanoto S, Bubb K, Simms E, Levy R, Clendenning J, Kaul R, Kent WJ, Furey TS, Baertsch RA, Brent MR, Keibler E, Flicek P, Bork P, Suyama M, Bailey JA, Portnoy ME, Torrents D, Chinwalla AT, Gish WR, Eddy SR, McPherson JD, Olson MV, Eichler EE, Green ED, Waterston RH, Wilson RK.
Hillier LW, et al. Among authors: keibler e.
Nature. 2003 Jul 10;424(6945):157-64. doi: 10.1038/nature01782.
Nature. 2003.
PMID: 12853948
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Eval: a software package for analysis of genome annotations.
Keibler E, Brent MR.
Keibler E, et al.
BMC Bioinformatics. 2003 Oct 17;4:50. doi: 10.1186/1471-2105-4-50.
BMC Bioinformatics. 2003.
PMID: 14565849
Free PMC article.
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Comparison of mouse and human genomes followed by experimental verification yields an estimated 1,019 additional genes.
Guigo R, Dermitzakis ET, Agarwal P, Ponting CP, Parra G, Reymond A, Abril JF, Keibler E, Lyle R, Ucla C, Antonarakis SE, Brent MR.
Guigo R, et al. Among authors: keibler e.
Proc Natl Acad Sci U S A. 2003 Feb 4;100(3):1140-5. doi: 10.1073/pnas.0337561100. Epub 2003 Jan 27.
Proc Natl Acad Sci U S A. 2003.
PMID: 12552088
Free PMC article.
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The Treeterbi and Parallel Treeterbi algorithms: efficient, optimal decoding for ordinary, generalized and pair HMMs.
Keibler E, Arumugam M, Brent MR.
Keibler E, et al.
Bioinformatics. 2007 Mar 1;23(5):545-54. doi: 10.1093/bioinformatics/btl659. Epub 2007 Jan 18.
Bioinformatics. 2007.
PMID: 17237054
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