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The global spread of HIV-1 subtype B epidemic.
Magiorkinis G, Angelis K, Mamais I, Katzourakis A, Hatzakis A, Albert J, Lawyer G, Hamouda O, Struck D, Vercauteren J, Wensing A, Alexiev I, Åsjö B, Balotta C, Gomes P, Camacho RJ, Coughlan S, Griskevicius A, Grossman Z, Horban A, Kostrikis LG, Lepej SJ, Liitsola K, Linka M, Nielsen C, Otelea D, Paredes R, Poljak M, Puchhammer-Stöckl E, Schmit JC, Sönnerborg A, Staneková D, Stanojevic M, Stylianou DC, Boucher CAB; SPREAD program; Nikolopoulos G, Vasylyeva T, Friedman SR, van de Vijver D, Angarano G, Chaix ML, de Luca A, Korn K, Loveday C, Soriano V, Yerly S, Zazzi M, Vandamme AM, Paraskevis D. Magiorkinis G, et al. Among authors: katzourakis a. Infect Genet Evol. 2016 Dec;46:169-179. doi: 10.1016/j.meegid.2016.05.041. Epub 2016 Jun 2. Infect Genet Evol. 2016. PMID: 27262355 Free PMC article.
The evolution of SARS-CoV-2.
Markov PV, Ghafari M, Beer M, Lythgoe K, Simmonds P, Stilianakis NI, Katzourakis A. Markov PV, et al. Among authors: katzourakis a. Nat Rev Microbiol. 2023 Jun;21(6):361-379. doi: 10.1038/s41579-023-00878-2. Epub 2023 Apr 5. Nat Rev Microbiol. 2023. PMID: 37020110 Review.
Env-less endogenous retroviruses are genomic superspreaders.
Magiorkinis G, Gifford RJ, Katzourakis A, De Ranter J, Belshaw R. Magiorkinis G, et al. Among authors: katzourakis a. Proc Natl Acad Sci U S A. 2012 May 8;109(19):7385-90. doi: 10.1073/pnas.1200913109. Epub 2012 Apr 23. Proc Natl Acad Sci U S A. 2012. PMID: 22529376 Free PMC article.
Larger mammalian body size leads to lower retroviral activity.
Katzourakis A, Magiorkinis G, Lim AG, Gupta S, Belshaw R, Gifford R. Katzourakis A, et al. PLoS Pathog. 2014 Jul 17;10(7):e1004214. doi: 10.1371/journal.ppat.1004214. eCollection 2014 Jul. PLoS Pathog. 2014. PMID: 25033295 Free PMC article.
De Novo Assembly of Human Herpes Virus Type 1 (HHV-1) Genome, Mining of Non-Canonical Structures and Detection of Novel Drug-Resistance Mutations Using Short- and Long-Read Next Generation Sequencing Technologies.
Karamitros T, Harrison I, Piorkowska R, Katzourakis A, Magiorkinis G, Mbisa JL. Karamitros T, et al. Among authors: katzourakis a. PLoS One. 2016 Jun 16;11(6):e0157600. doi: 10.1371/journal.pone.0157600. eCollection 2016. PLoS One. 2016. PMID: 27309375 Free PMC article.
A contaminant-free assessment of Endogenous Retroviral RNA in human plasma.
Karamitros T, Paraskevis D, Hatzakis A, Psichogiou M, Elefsiniotis I, Hurst T, Geretti AM, Beloukas A, Frater J, Klenerman P, Katzourakis A, Magiorkinis G. Karamitros T, et al. Among authors: katzourakis a. Sci Rep. 2016 Sep 19;6:33598. doi: 10.1038/srep33598. Sci Rep. 2016. PMID: 27640347 Free PMC article.
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