Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

Search Results

331 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Results By Year timeline is not available.
Page 1
The principles of tomorrow's university.
Katz DS, Allen G, Barba LA, Berg DR, Bik H, Boettiger C, Borgman CL, Brown CT, Buck S, Burd R, de Waard A, Eve MP, Granger BE, Greenberg J, Howe A, Howe B, Khanna M, Killeen TL, Mayernik M, McKiernan E, Mentzel C, Merchant N, Niemeyer KE, Noren L, Nusser SM, Reed DA, Seidel E, Smith M, Spies JR, Turk M, Van Horn JD, Walsh J. Katz DS, et al. F1000Res. 2018 Dec 11;7:1926. doi: 10.12688/f1000research.17425.1. eCollection 2018. F1000Res. 2018. PMID: 30687499 Free PMC article.
A multi-disciplinary perspective on emergent and future innovations in peer review.
Tennant JP, Dugan JM, Graziotin D, Jacques DC, Waldner F, Mietchen D, Elkhatib Y, B Collister L, Pikas CK, Crick T, Masuzzo P, Caravaggi A, Berg DR, Niemeyer KE, Ross-Hellauer T, Mannheimer S, Rigling L, Katz DS, Greshake Tzovaras B, Pacheco-Mendoza J, Fatima N, Poblet M, Isaakidis M, Irawan DE, Renaut S, Madan CR, Matthias L, Nørgaard Kjær J, O'Donnell DP, Neylon C, Kearns S, Selvaraju M, Colomb J. Tennant JP, et al. Among authors: katz ds. F1000Res. 2017 Jul 20;6:1151. doi: 10.12688/f1000research.12037.3. eCollection 2017. F1000Res. 2017. PMID: 29188015 Free PMC article. Review.
Journal of Open Source Software (JOSS): design and first-year review.
Smith AM, Niemeyer KE, Katz DS, Barba LA, Githinji G, Gymrek M, Huff KD, Madan CR, Mayes AC, Moerman KM, Prins P, Ram K, Rokem A, Teal TK, Guimera RV, Vanderplas JT. Smith AM, et al. Among authors: katz ds. PeerJ Prepr. 2018;4:e147. doi: 10.7717/peerj-cs.147. Epub 2018 Feb 12. PeerJ Prepr. 2018. PMID: 32704456 Free PMC article.
Four simple recommendations to encourage best practices in research software.
Jiménez RC, Kuzak M, Alhamdoosh M, Barker M, Batut B, Borg M, Capella-Gutierrez S, Chue Hong N, Cook M, Corpas M, Flannery M, Garcia L, Gelpí JL, Gladman S, Goble C, González Ferreiro M, Gonzalez-Beltran A, Griffin PC, Grüning B, Hagberg J, Holub P, Hooft R, Ison J, Katz DS, Leskošek B, López Gómez F, Oliveira LJ, Mellor D, Mosbergen R, Mulder N, Perez-Riverol Y, Pergl R, Pichler H, Pope B, Sanz F, Schneider MV, Stodden V, Suchecki R, Svobodová Vařeková R, Talvik HA, Todorov I, Treloar A, Tyagi S, van Gompel M, Vaughan D, Via A, Wang X, Watson-Haigh NS, Crouch S. Jiménez RC, et al. Among authors: katz ds. F1000Res. 2017 Jun 13;6:ELIXIR-876. doi: 10.12688/f1000research.11407.1. eCollection 2017. F1000Res. 2017. PMID: 28751965 Free PMC article.
The challenges of theory-software translation.
Jay C, Haines R, Katz DS, Carver JC, Gesing S, Brandt SR, Howison J, Dubey A, Phillips JC, Wan H, Turk MJ. Jay C, et al. Among authors: katz ds. F1000Res. 2020 Oct 2;9:1192. doi: 10.12688/f1000research.25561.1. eCollection 2020. F1000Res. 2020. PMID: 33214878 Free PMC article.
Recognizing the value of software: a software citation guide.
Katz DS, Chue Hong NP, Clark T, Muench A, Stall S, Bouquin D, Cannon M, Edmunds S, Faez T, Feeney P, Fenner M, Friedman M, Grenier G, Harrison M, Heber J, Leary A, MacCallum C, Murray H, Pastrana E, Perry K, Schuster D, Stockhause M, Yeston J. Katz DS, et al. F1000Res. 2020 Oct 19;9:1257. doi: 10.12688/f1000research.26932.2. eCollection 2020. F1000Res. 2020. PMID: 33500780 Free PMC article.
Introducing the FAIR Principles for research software.
Barker M, Chue Hong NP, Katz DS, Lamprecht AL, Martinez-Ortiz C, Psomopoulos F, Harrow J, Castro LJ, Gruenpeter M, Martinez PA, Honeyman T. Barker M, et al. Among authors: katz ds. Sci Data. 2022 Oct 14;9(1):622. doi: 10.1038/s41597-022-01710-x. Sci Data. 2022. PMID: 36241754 Free PMC article.
FAIR-USE4OS: Guidelines for creating impactful open-source software.
Sonabend R, Gruson H, Wolansky L, Kiragga A, Katz DS. Sonabend R, et al. Among authors: katz ds. PLoS Comput Biol. 2024 May 9;20(5):e1012045. doi: 10.1371/journal.pcbi.1012045. eCollection 2024 May. PLoS Comput Biol. 2024. PMID: 38722873 Free PMC article.
331 results