Katayama S - Search Results

1

Human endometrial cell-type-specific RNA sequencing provides new insights into the embryo-endometrium interplay.

Koel M, Krjutškov K, Saare M, Samuel K, Lubenets D, Katayama S, Einarsdottir E, Vargas E, Sola-Leyva A, Lalitkumar PG, Gemzell-Danielsson K, Blesa D, Simon C, Lanner F, Kere J, Salumets A, Altmäe S. Koel M, et al. Among authors: katayama s. Hum Reprod Open. 2022 Oct 13;2022(4):hoac043. doi: 10.1093/hropen/hoac043. eCollection 2022. Hum Reprod Open. 2022. PMID: 36339249 Free PMC article.

2

SAMstrt: statistical test for differential expression in single-cell transcriptome with spike-in normalization.

Katayama S, Töhönen V, Linnarsson S, Kere J. Katayama S, et al. Bioinformatics. 2013 Nov 15;29(22):2943-5. doi: 10.1093/bioinformatics/btt511. Epub 2013 Aug 31. Bioinformatics. 2013. PMID: 23995393 Free PMC article.

3

Differences in gene expression between mouse and human for dynamically regulated genes in early embryo.

Madissoon E, Töhönen V, Vesterlund L, Katayama S, Unneberg P, Inzunza J, Hovatta O, Kere J. Madissoon E, et al. Among authors: katayama s. PLoS One. 2014 Aug 4;9(8):e102949. doi: 10.1371/journal.pone.0102949. eCollection 2014. PLoS One. 2014. PMID: 25089626 Free PMC article.

4

Gene expression analysis of skin grafts and cultured keratinocytes using synthetic RNA normalization reveals insights into differentiation and growth control.

Katayama S, Skoog T, Jouhilahti EM, Siitonen HA, Nuutila K, Tervaniemi MH, Vuola J, Johnsson A, Lönnerberg P, Linnarsson S, Elomaa O, Kankuri E, Kere J. Katayama S, et al. BMC Genomics. 2015 Jun 25;16(1):476. doi: 10.1186/s12864-015-1671-5. BMC Genomics. 2015. PMID: 26108968 Free PMC article.

5

Novel PRD-like homeodomain transcription factors and retrotransposon elements in early human development.

Töhönen V, Katayama S, Vesterlund L, Jouhilahti EM, Sheikhi M, Madissoon E, Filippini-Cattaneo G, Jaconi M, Johnsson A, Bürglin TR, Linnarsson S, Hovatta O, Kere J. Töhönen V, et al. Among authors: katayama s. Nat Commun. 2015 Sep 11;6:8207. doi: 10.1038/ncomms9207. Nat Commun. 2015. PMID: 26360614 Free PMC article.

6

Single-cell transcriptome analysis of endometrial tissue.

Krjutškov K, Katayama S, Saare M, Vera-Rodriguez M, Lubenets D, Samuel K, Laisk-Podar T, Teder H, Einarsdottir E, Salumets A, Kere J. Krjutškov K, et al. Among authors: katayama s. Hum Reprod. 2016 Apr;31(4):844-53. doi: 10.1093/humrep/dew008. Epub 2016 Feb 13. Hum Reprod. 2016. PMID: 26874359 Free PMC article.

7

NOD-like receptor signaling and inflammasome-related pathways are highlighted in psoriatic epidermis.

Tervaniemi MH, Katayama S, Skoog T, Siitonen HA, Vuola J, Nuutila K, Sormunen R, Johnsson A, Linnarsson S, Suomela S, Kankuri E, Kere J, Elomaa O. Tervaniemi MH, et al. Among authors: katayama s. Sci Rep. 2016 Mar 15;6:22745. doi: 10.1038/srep22745. Sci Rep. 2016. PMID: 26976200 Free PMC article.

8

Gene-Expression Profiling Suggests Impaired Signaling via the Interferon Pathway in Cstb-/- Microglia.

Körber I, Katayama S, Einarsdottir E, Krjutškov K, Hakala P, Kere J, Lehesjoki AE, Joensuu T. Körber I, et al. Among authors: katayama s. PLoS One. 2016 Jun 29;11(6):e0158195. doi: 10.1371/journal.pone.0158195. eCollection 2016. PLoS One. 2016. PMID: 27355630 Free PMC article.

9

Characterization and target genes of nine human PRD-like homeobox domain genes expressed exclusively in early embryos.

Madissoon E, Jouhilahti EM, Vesterlund L, Töhönen V, Krjutškov K, Petropoulos S, Einarsdottir E, Linnarsson S, Lanner F, Månsson R, Hovatta O, Bürglin TR, Katayama S, Kere J. Madissoon E, et al. Among authors: katayama s. Sci Rep. 2016 Jul 14;6:28995. doi: 10.1038/srep28995. Sci Rep. 2016. PMID: 27412763 Free PMC article.

10

Globin mRNA reduction for whole-blood transcriptome sequencing.

Krjutškov K, Koel M, Roost AM, Katayama S, Einarsdottir E, Jouhilahti EM, Söderhäll C, Jaakma Ü, Plaas M, Vesterlund L, Lohi H, Salumets A, Kere J. Krjutškov K, et al. Among authors: katayama s. Sci Rep. 2016 Aug 12;6:31584. doi: 10.1038/srep31584. Sci Rep. 2016. PMID: 27515369 Free PMC article.

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