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Human-in-the-loop assisted de novo molecular design.
Sundin I, Voronov A, Xiao H, Papadopoulos K, Bjerrum EJ, Heinonen M, Patronov A, Kaski S, Engkvist O. Sundin I, et al. Among authors: kaski s. J Cheminform. 2022 Dec 28;14(1):86. doi: 10.1186/s13321-022-00667-8. J Cheminform. 2022. PMID: 36578043 Free PMC article.
Bayesian metabolic flux analysis reveals intracellular flux couplings.
Heinonen M, Osmala M, Mannerström H, Wallenius J, Kaski S, Rousu J, Lähdesmäki H. Heinonen M, et al. Among authors: kaski s. Bioinformatics. 2019 Jul 15;35(14):i548-i557. doi: 10.1093/bioinformatics/btz315. Bioinformatics. 2019. PMID: 31510676 Free PMC article.
Substrate specificity of 2-deoxy-D-ribose 5-phosphate aldolase (DERA) assessed by different protein engineering and machine learning methods.
Voutilainen S, Heinonen M, Andberg M, Jokinen E, Maaheimo H, Pääkkönen J, Hakulinen N, Rouvinen J, Lähdesmäki H, Kaski S, Rousu J, Penttilä M, Koivula A. Voutilainen S, et al. Among authors: kaski s. Appl Microbiol Biotechnol. 2020 Dec;104(24):10515-10529. doi: 10.1007/s00253-020-10960-x. Epub 2020 Nov 4. Appl Microbiol Biotechnol. 2020. PMID: 33147349 Free PMC article.
Probabilistic drug connectivity mapping.
Parkkinen JA, Kaski S. Parkkinen JA, et al. Among authors: kaski s. BMC Bioinformatics. 2014 Apr 17;15:113. doi: 10.1186/1471-2105-15-113. BMC Bioinformatics. 2014. PMID: 24742351 Free PMC article.
Privacy-preserving data sharing via probabilistic modeling.
Jälkö J, Lagerspetz E, Haukka J, Tarkoma S, Honkela A, Kaski S. Jälkö J, et al. Among authors: kaski s. Patterns (N Y). 2021 Jun 7;2(7):100271. doi: 10.1016/j.patter.2021.100271. eCollection 2021 Jul 9. Patterns (N Y). 2021. PMID: 34286296 Free PMC article.
103 results