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Page 1
Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.
Ruzzo EK, Pérez-Cano L, Jung JY, Wang LK, Kashef-Haghighi D, Hartl C, Singh C, Xu J, Hoekstra JN, Leventhal O, Leppä VM, Gandal MJ, Paskov K, Stockham N, Polioudakis D, Lowe JK, Prober DA, Geschwind DH, Wall DP. Ruzzo EK, et al. Among authors: kashef haghighi d. Cell. 2019 Aug 8;178(4):850-866.e26. doi: 10.1016/j.cell.2019.07.015. Cell. 2019. PMID: 31398340 Free PMC article.
DE NOVO MUTATIONS IN AUTISM IMPLICATE THE SYNAPTIC ELIMINATION NETWORK.
Venkataraman GR, O'Connell C, Egawa F, Kashef-Haghighi D, Wall DP. Venkataraman GR, et al. Among authors: kashef haghighi d. Pac Symp Biocomput. 2017;22:521-532. doi: 10.1142/9789813207813_0048. Pac Symp Biocomput. 2017. PMID: 27897003 Free article.
Inference of tumor phylogenies with improved somatic mutation discovery.
Salari R, Saleh SS, Kashef-Haghighi D, Khavari D, Newburger DE, West RB, Sidow A, Batzoglou S. Salari R, et al. Among authors: kashef haghighi d. J Comput Biol. 2013 Nov;20(11):933-44. doi: 10.1089/cmb.2013.0106. J Comput Biol. 2013. PMID: 24195709 Free PMC article.
Read clouds uncover variation in complex regions of the human genome.
Bishara A, Liu Y, Weng Z, Kashef-Haghighi D, Newburger DE, West R, Sidow A, Batzoglou S. Bishara A, et al. Among authors: kashef haghighi d. Genome Res. 2015 Oct;25(10):1570-80. doi: 10.1101/gr.191189.115. Epub 2015 Aug 18. Genome Res. 2015. PMID: 26286554 Free PMC article.
Fast and scalable inference of multi-sample cancer lineages.
Popic V, Salari R, Hajirasouliha I, Kashef-Haghighi D, West RB, Batzoglou S. Popic V, et al. Among authors: kashef haghighi d. Genome Biol. 2015 May 6;16(1):91. doi: 10.1186/s13059-015-0647-8. Genome Biol. 2015. PMID: 25944252 Free PMC article.
Genome evolution during progression to breast cancer.
Newburger DE, Kashef-Haghighi D, Weng Z, Salari R, Sweeney RT, Brunner AL, Zhu SX, Guo X, Varma S, Troxell ML, West RB, Batzoglou S, Sidow A. Newburger DE, et al. Among authors: kashef haghighi d. Genome Res. 2013 Jul;23(7):1097-108. doi: 10.1101/gr.151670.112. Epub 2013 Apr 8. Genome Res. 2013. PMID: 23568837 Free PMC article.