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Genome-wide Mycobacterium tuberculosis variation (GMTV) database: a new tool for integrating sequence variations and epidemiology.
Chernyaeva EN, Shulgina MV, Rotkevich MS, Dobrynin PV, Simonov SA, Shitikov EA, Ischenko DS, Karpova IY, Kostryukova ES, Ilina EN, Govorun VM, Zhuravlev VY, Manicheva OA, Yablonsky PK, Isaeva YD, Nosova EY, Mokrousov IV, Vyazovaya AA, Narvskaya OV, Lapidus AL, O'Brien SJ. Chernyaeva EN, et al. Among authors: karpova iy. BMC Genomics. 2014 Apr 25;15:308. doi: 10.1186/1471-2164-15-308. BMC Genomics. 2014. PMID: 24767249 Free PMC article.
Unusual large-scale chromosomal rearrangements in Mycobacterium tuberculosis Beijing B0/W148 cluster isolates.
Shitikov EA, Bespyatykh JA, Ischenko DS, Alexeev DG, Karpova IY, Kostryukova ES, Isaeva YD, Nosova EY, Mokrousov IV, Vyazovaya AA, Narvskaya OV, Vishnevsky BI, Otten TF, Zhuravlev VIu, Yablonsky PK, Ilina EN, Govorun VM. Shitikov EA, et al. Among authors: karpova iy. PLoS One. 2014 Jan 8;9(1):e84971. doi: 10.1371/journal.pone.0084971. eCollection 2014. PLoS One. 2014. PMID: 24416324 Free PMC article.
Genome analysis of E. coli isolated from Crohn's disease patients.
Rakitina DV, Manolov AI, Kanygina AV, Garushyants SK, Baikova JP, Alexeev DG, Ladygina VG, Kostryukova ES, Larin AK, Semashko TA, Karpova IY, Babenko VV, Ismagilova RK, Malanin SY, Gelfand MS, Ilina EN, Gorodnichev RB, Lisitsyna ES, Aleshkin GI, Scherbakov PL, Khalif IL, Shapina MV, Maev IV, Andreev DN, Govorun VM. Rakitina DV, et al. Among authors: karpova iy. BMC Genomics. 2017 Jul 19;18(1):544. doi: 10.1186/s12864-017-3917-x. BMC Genomics. 2017. PMID: 28724357 Free PMC article.
Genetic diversity of Escherichia coli in gut microbiota of patients with Crohn's disease discovered using metagenomic and genomic analyses.
Tyakht AV, Manolov AI, Kanygina AV, Ischenko DS, Kovarsky BA, Popenko AS, Pavlenko AV, Elizarova AV, Rakitina DV, Baikova JP, Ladygina VG, Kostryukova ES, Karpova IY, Semashko TA, Larin AK, Grigoryeva TV, Sinyagina MN, Malanin SY, Shcherbakov PL, Kharitonova AY, Khalif IL, Shapina MV, Maev IV, Andreev DN, Belousova EA, Buzunova YM, Alexeev DG, Govorun VM. Tyakht AV, et al. Among authors: karpova iy. BMC Genomics. 2018 Dec 27;19(1):968. doi: 10.1186/s12864-018-5306-5. BMC Genomics. 2018. PMID: 30587114 Free PMC article.
Isolation of single Chlamydia-infected cells using laser microdissection.
Podgorny OV, Polina NF, Babenko VV, Karpova IY, Kostryukova ES, Govorun VM, Lazarev VN. Podgorny OV, et al. Among authors: karpova iy. J Microbiol Methods. 2015 Feb;109:123-8. doi: 10.1016/j.mimet.2014.12.018. Epub 2014 Dec 26. J Microbiol Methods. 2015. PMID: 25546842
The mystery of the fourth clone: comparative genomic analysis of four non-typeable Streptococcus pneumoniae strains with different susceptibilities to optochin.
Ikryannikova LN, Ischenko DS, Lominadze GG, Kanygina AV, Karpova IY, Kostryukova ES, Mayansky NA, Skvortsov VS, Ilina EN, Govorun VM. Ikryannikova LN, et al. Among authors: karpova iy. Eur J Clin Microbiol Infect Dis. 2016 Jan;35(1):119-30. doi: 10.1007/s10096-015-2516-5. Epub 2015 Nov 12. Eur J Clin Microbiol Infect Dis. 2016. PMID: 26563895
Inhibitory effect of streptococci on the growth of M. catarrhalis strains and the diversity of putative bacteriocin-like gene loci in the genomes of S. pneumoniae and its relatives.
Ikryannikova LN, Malakhova MV, Lominadze GG, Karpova IY, Kostryukova ES, Mayansky NA, Kruglov AN, Klimova EA, Lisitsina ES, Ilina EN, Govorun VM. Ikryannikova LN, et al. Among authors: karpova iy. AMB Express. 2017 Dec 13;7(1):218. doi: 10.1186/s13568-017-0521-z. AMB Express. 2017. PMID: 29236192 Free PMC article.
Human gut microbiota community structures in urban and rural populations in Russia.
Tyakht AV, Kostryukova ES, Popenko AS, Belenikin MS, Pavlenko AV, Larin AK, Karpova IY, Selezneva OV, Semashko TA, Ospanova EA, Babenko VV, Maev IV, Cheremushkin SV, Kucheryavyy YA, Shcherbakov PL, Grinevich VB, Efimov OI, Sas EI, Abdulkhakov RA, Abdulkhakov SR, Lyalyukova EA, Livzan MA, Vlassov VV, Sagdeev RZ, Tsukanov VV, Osipenko MF, Kozlova IV, Tkachev AV, Sergienko VI, Alexeev DG, Govorun VM. Tyakht AV, et al. Among authors: karpova iy. Nat Commun. 2013;4:2469. doi: 10.1038/ncomms3469. Nat Commun. 2013. PMID: 24036685 Free PMC article.
17 results