Karpova G - Search Results

1

The first position of a codon placed in the A site of the human 80S ribosome contacts nucleotide C1696 of the 18S rRNA as well as proteins S2, S3, S3a, S30, and S15.

Bulygin K, Chavatte L, Frolova L, Karpova G, Favre A. Bulygin K, et al. Among authors: karpova g. Biochemistry. 2005 Feb 15;44(6):2153-62. doi: 10.1021/bi0487802. Biochemistry. 2005. PMID: 15697241

2

Sites of 18S rRNA contacting mRNA 3' and 5' of the P site codon in human ribosome: a cross-linking study with mRNAs carrying 4-thiouridines at specific positions.

Bulygin K, Baouz-Drahy S, Graifer D, Favre A, Karpova G. Bulygin K, et al. Among authors: karpova g. Biochim Biophys Acta. 2009 Mar;1789(3):167-74. doi: 10.1016/j.bbagrm.2008.12.001. Epub 2008 Dec 11. Biochim Biophys Acta. 2009. PMID: 19118656

3

The CCA-end of P-tRNA Contacts Both the Human RPL36AL and the A-site Bound Translation Termination Factor eRF1 at the Peptidyl Transferase Center of the Human 80S Ribosome.

Hountondji C, Bulygin K, Créchet JB, Woisard A, Tuffery P, Nakayama J, Frolova L, Nierhaus KH, Karpova G, Baouz S. Hountondji C, et al. Among authors: karpova g. Open Biochem J. 2014 Jul 11;8:52-67. doi: 10.2174/1874091X01408010052. eCollection 2014. Open Biochem J. 2014. PMID: 25191528 Free PMC article.

4

Eukaryote-specific motif of ribosomal protein S15 neighbors A site codon during elongation and termination of translation.

Khairulina J, Graifer D, Bulygin K, Ven'yaminova A, Frolova L, Karpova G. Khairulina J, et al. Among authors: karpova g. Biochimie. 2010 Jul;92(7):820-5. doi: 10.1016/j.biochi.2010.02.031. Epub 2010 Mar 3. Biochimie. 2010. PMID: 20206660

5

Lys53 of ribosomal protein L36AL and the CCA end of a tRNA at the P/E hybrid site are in close proximity on the human ribosome.

Hountondji C, Bulygin K, Woisard A, Tuffery P, Créchet JB, Pech M, Nierhaus KH, Karpova G, Baouz S. Hountondji C, et al. Among authors: karpova g. Chembiochem. 2012 Aug 13;13(12):1791-7. doi: 10.1002/cbic.201200208. Chembiochem. 2012. PMID: 22865768

6

Positioning of the mRNA stop signal with respect to polypeptide chain release factors and ribosomal proteins in 80S ribosomes.

Bulygin KN, Repkova MN, Ven'yaminova AG, Graifer DM, Karpova GG, Frolova LY, Kisselev LL. Bulygin KN, et al. Among authors: karpova gg. FEBS Lett. 2002 Mar 6;514(1):96-101. doi: 10.1016/s0014-5793(02)02304-9. FEBS Lett. 2002. PMID: 11904189 Free article.

7

mRNA 3' of the A site bound codon is located close to protein S3 on the human 80S ribosome.

Molotkov MV, Graifer DM, Popugaeva EA, Bulygin KN, Meschaninova MI, Ven'yaminova AG, Karpova GG. Molotkov MV, et al. Among authors: karpova gg. RNA Biol. 2006 Jul;3(3):122-9. doi: 10.4161/rna.3.3.3584. Epub 2006 Jul 7. RNA Biol. 2006. PMID: 17179743

8

Chemical footprinting reveals conformational changes of 18S and 28S rRNAs at different steps of translation termination on the human ribosome.

Bulygin KN, Bartuli YS, Malygin AA, Graifer DM, Frolova LY, Karpova GG. Bulygin KN, et al. Among authors: karpova gg. RNA. 2016 Feb;22(2):278-89. doi: 10.1261/rna.053801.115. Epub 2015 Dec 11. RNA. 2016. PMID: 26655225 Free PMC article.

9

Exploring contacts of eRF1 with the 3'-terminus of the P site tRNA and mRNA stop signal in the human ribosome at various translation termination steps.

Bulygin KN, Graifer DM, Hountondji C, Frolova LY, Karpova GG. Bulygin KN, et al. Among authors: karpova gg. Biochim Biophys Acta Gene Regul Mech. 2017 Jul;1860(7):782-793. doi: 10.1016/j.bbagrm.2017.04.004. Epub 2017 Apr 27. Biochim Biophys Acta Gene Regul Mech. 2017. PMID: 28457996

10

Arrangement of mRNA at the decoding site of human ribosomes. 18S rRNA nucleotides and ribosomal proteins cross-linked to oligouridylate derivatives with alkylating groups at either the 3' or the 5' termini.

Malygin AA, Graifer DM, Bulygin KN, Zenkova MA, Yamkovoy VI, Stahl J, Karpova GG. Malygin AA, et al. Among authors: karpova gg. Eur J Biochem. 1994 Dec 1;226(2):715-23. doi: 10.1111/j.1432-1033.1994.tb20100.x. Eur J Biochem. 1994. PMID: 8001589 Free article.

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