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Crystal Structure of Inhibitor-Bound Bacterial Oligopeptidase B in the Closed State: Similarity and Difference between Protozoan and Bacterial Enzymes.
Int J Mol Sci. 2023 Jan 24;24(3):2286. doi: 10.3390/ijms24032286.
Int J Mol Sci. 2023.
PMID: 36768612
Free PMC article.
Activity modulation of the oligopeptidase B from Serratia proteamaculans by site-directed mutagenesis of amino acid residues surrounding catalytic triad histidine.
Mikhailova AG, Rakitina TV, Timofeev VI, Karlinsky DM, Korzhenevskiy DA, Agapova YК, Vlaskina AV, Ovchinnikova MV, Gorlenko VA, Rumsh LD.
Mikhailova AG, et al. Among authors: karlinsky dm.
Biochimie. 2017 Aug;139:125-136. doi: 10.1016/j.biochi.2017.05.013. Epub 2017 May 27.
Biochimie. 2017.
PMID: 28554571
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Molecular dynamics complemented by site-directed mutagenesis reveals significant difference between the interdomain salt bridge networks stabilizing oligopeptidases B from bacteria and protozoa in their active conformations.
Petrenko DE, Mikhailova AG, Timofeev VI, Agapova YК, Karlinsky DM, Komolov AS, Korzhenevskiy DA, Vlaskina AV, Rumsh LD, Rakitina TV.
Petrenko DE, et al. Among authors: karlinsky dm.
J Biomol Struct Dyn. 2020 Oct;38(16):4868-4882. doi: 10.1080/07391102.2019.1692694. Epub 2019 Nov 25.
J Biomol Struct Dyn. 2020.
PMID: 31724904
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Reversible Cyclic Thermal Inactivation of Oligopeptidase B from Serratia proteamaculans.
Ovchinnikova MV, Mikhailova AG, Karlinsky DM, Gorlenko VA, Rumsh LD.
Ovchinnikova MV, et al. Among authors: karlinsky dm.
Acta Naturae. 2018 Apr-Jun;10(2):65-70.
Acta Naturae. 2018.
PMID: 30116617
Free PMC article.
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Specific Antibodies to the Fragments of Meningococcal IgA1 Protease during the Formation of Immunity to Bacterial Infections.
Kotel'nikova OV, Prokopenko YA, Zinchenko AA, Razgulyaeva OA, Nokel' EA, Karlinsky DM, Zhigis LS, Rumsh LD.
Kotel'nikova OV, et al. Among authors: karlinsky dm.
Bull Exp Biol Med. 2022 Aug;173(4):429-432. doi: 10.1007/s10517-022-05580-6. Epub 2022 Sep 5.
Bull Exp Biol Med. 2022.
PMID: 36058967
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Correction to: Specific Antibodies to the Fragments of Meningococcal IgA1 Protease during the Formation of Immunity to Bacterial Infections.
Kotel'nikova OV, Prokopenko YA, Zinchenko AA, Razgulyaeva OA, Nokel' EA, Karlinsky DM, Zhigis LS, Rumsh LD.
Kotel'nikova OV, et al. Among authors: karlinsky dm.
Bull Exp Biol Med. 2022 Sep;173(5):687-690. doi: 10.1007/s10517-022-05614-z. Epub 2022 Oct 10.
Bull Exp Biol Med. 2022.
PMID: 36210428
No abstract available.
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Highly Similar Sequences of Mature IgA1 Proteases from Neisseria meningitidis, Neisseria gonorrhoeae and Haemophilus influenzae.
Karlinsky D, Prokopenko Y, Zinchenko A, Zhigis L, Kotelnikova O, Rumsh L, Smirnov I.
Karlinsky D, et al.
Pathogens. 2022 Jun 28;11(7):734. doi: 10.3390/pathogens11070734.
Pathogens. 2022.
PMID: 35889980
Free PMC article.
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