Kalinina OV - Search Results

1

Adenosine-to-Inosine RNA Editing in Mouse and Human Brain Proteomes.

Levitsky LI, Kliuchnikova AA, Kuznetsova KG, Karpov DS, Ivanov MV, Pyatnitskiy MA, Kalinina OV, Gorshkov MV, Moshkovskii SA. Levitsky LI, et al. Among authors: kalinina ov. Proteomics. 2019 Dec;19(23):e1900195. doi: 10.1002/pmic.201900195. Epub 2019 Nov 13. Proteomics. 2019. PMID: 31576663

2

Quantifying Argonaute 2 (Ago2) expression to stratify breast cancer.

Casey MC, Prakash A, Holian E, McGuire A, Kalinina O, Shalaby A, Curran C, Webber M, Callagy G, Bourke E, Kerin MJ, Brown JA. Casey MC, et al. BMC Cancer. 2019 Jul 19;19(1):712. doi: 10.1186/s12885-019-5884-x. BMC Cancer. 2019. PMID: 31324173 Free PMC article.

3

Nanoliter scale PCR with TaqMan detection.

Kalinina O, Lebedeva I, Brown J, Silver J. Kalinina O, et al. Nucleic Acids Res. 1997 May 15;25(10):1999-2004. doi: 10.1093/nar/25.10.1999. Nucleic Acids Res. 1997. PMID: 9115368 Free PMC article.

4

Self-Antigen-Driven Thymic B Cell Class Switching Promotes T Cell Central Tolerance.

Perera J, Zheng Z, Li S, Gudjonson H, Kalinina O, Benichou JIC, Block KE, Louzoun Y, Yin D, Chong AS, Dinner AR, Weigert M, Huang H. Perera J, et al. Cell Rep. 2016 Oct 4;17(2):387-398. doi: 10.1016/j.celrep.2016.09.011. Cell Rep. 2016. PMID: 27705788 Free PMC article.

5

An extended catalogue of tandem alternative splice sites in human tissue transcriptomes.

Mironov A, Denisov S, Gress A, Kalinina OV, Pervouchine DD. Mironov A, et al. Among authors: kalinina ov. PLoS Comput Biol. 2021 Apr 7;17(4):e1008329. doi: 10.1371/journal.pcbi.1008329. eCollection 2021 Apr. PLoS Comput Biol. 2021. PMID: 33826604 Free PMC article.

6

d-StructMAn: Containerized structural annotation on the scale from genetic variants to whole proteomes.

Gress A, Srikakulam SK, Keller S, Ramensky V, Kalinina OV. Gress A, et al. Among authors: kalinina ov. Gigascience. 2022 Sep 20;11:giac086. doi: 10.1093/gigascience/giac086. Gigascience. 2022. PMID: 36130085 Free PMC article.

7

DIGGER: exploring the functional role of alternative splicing in protein interactions.

Louadi Z, Yuan K, Gress A, Tsoy O, Kalinina OV, Baumbach J, Kacprowski T, List M. Louadi Z, et al. Among authors: kalinina ov. Nucleic Acids Res. 2021 Jan 8;49(D1):D309-D318. doi: 10.1093/nar/gkaa768. Nucleic Acids Res. 2021. PMID: 32976589 Free PMC article.

8

StructMAn: annotation of single-nucleotide polymorphisms in the structural context.

Gress A, Ramensky V, Büch J, Keller A, Kalinina OV. Gress A, et al. Among authors: kalinina ov. Nucleic Acids Res. 2016 Jul 8;44(W1):W463-8. doi: 10.1093/nar/gkw364. Epub 2016 May 5. Nucleic Acids Res. 2016. PMID: 27150811 Free PMC article.

9

BALL-SNPgp-from genetic variants toward computational diagnostics.

Mueller SC, Backes C, Gress A, Baumgarten N, Kalinina OV, Moll A, Kohlbacher O, Meese E, Keller A. Mueller SC, et al. Among authors: kalinina ov. Bioinformatics. 2016 Jun 15;32(12):1888-90. doi: 10.1093/bioinformatics/btw084. Epub 2016 Feb 15. Bioinformatics. 2016. PMID: 27153685

10

Spatial distribution of disease-associated variants in three-dimensional structures of protein complexes.

Gress A, Ramensky V, Kalinina OV. Gress A, et al. Among authors: kalinina ov. Oncogenesis. 2017 Sep 25;6(9):e380. doi: 10.1038/oncsis.2017.79. Oncogenesis. 2017. PMID: 28945216 Free PMC article.

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